CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005439_P001	Maize	plastid	83.06	88.69
Os07t0437000-01	Rice	mitochondrion	79.53	84.92
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	61.18	75.14
TraesCS4A01G313200.1	Wheat	mitochondrion	71.29	73.9
HORVU5Hr1G125560.2	Barley	mitochondrion	71.06	72.95
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	70.82	64.04
GSMUA_Achr11P...	Banana	cytosol	52.24	63.61
GSMUA_Achr1P03360_001	Banana	peroxisome	51.29	63.37
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	54.12	63.36
EES11777	Sorghum	cytosol, peroxisome, plastid	62.59	63.03
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	50.12	63.02
GSMUA_Achr4P25050_001	Banana	cytosol	55.53	62.43
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	55.29	61.84
CDY14900	Canola	cytosol	53.88	59.02
KRG95789	Soybean	cytosol, peroxisome, plastid	58.59	58.73
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	55.06	58.65
KRH67507	Soybean	cytosol, peroxisome, plastid	58.35	58.49
VIT_07s0005g04800.t01	Wine grape	cytosol	57.88	58.02
GSMUA_Achr2P04250_001	Banana	cytosol	51.06	57.26
CDX89837	Canola	cytosol, peroxisome, plastid	56.47	57.14
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	56.47	57.14
Bra032499.1-P	Field mustard	cytosol	56.71	57.11
CDY32533	Canola	cytosol	56.71	57.11
CDY10073	Canola	cytosol, peroxisome, plastid	56.47	57.01
KRH32274	Soybean	cytosol	56.71	56.97
Bra032524.1-P	Field mustard	cytosol	56.47	56.87
AT1G04180.1	Thale cress	cytosol	56.24	56.77
Solyc09g064160.2.1	Tomato	cytosol	55.29	56.63
PGSC0003DMT400030255	Potato	cytosol	55.76	56.56
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	56.24	56.5
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	50.12	56.5
CDY14230	Canola	cytosol	52.71	56.42
CDY18209	Canola	cytosol, peroxisome, plastid	56.0	56.4
PGSC0003DMT400038139	Potato	peroxisome	54.12	56.37
AT5G43890.1	Thale cress	cytosol	56.24	56.37
Solyc06g008050.2.1	Tomato	peroxisome	54.35	56.2
AT2G33230.1	Thale cress	plastid	56.94	56.15
CDY17153	Canola	peroxisome	57.41	55.96
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	54.59	55.9
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	56.0	55.87
CDX94734	Canola	cytosol, peroxisome, plastid	56.0	55.87
CDY53200	Canola	golgi, peroxisome, plastid	56.47	55.81
KRH33524	Soybean	cytosol, peroxisome, plastid	57.88	55.78
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	57.18	55.73
CDY22326	Canola	cytosol	55.76	55.63
CDY19472	Canola	cytosol, peroxisome, plastid	56.94	55.5
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	57.18	55.48
PGSC0003DMT400051713	Potato	cytosol	54.12	55.29
CDY69333	Canola	cytosol	54.12	55.16
KRG90286	Soybean	cytosol, peroxisome, plastid	56.94	55.13
Solyc06g083700.2.1	Tomato	cytosol	53.88	55.05
CDY61147	Canola	plastid	56.47	55.05
CDX89807	Canola	plastid	56.47	55.05
Bra015334.1-P	Field mustard	plastid	56.47	55.05
Bra010354.1-P	Field mustard	cytosol	55.06	54.93
AT1G04610.1	Thale cress	cytosol	56.47	54.92
Solyc09g091090.1.1	Tomato	peroxisome	55.53	54.76
OQU88910	Sorghum	plastid	29.18	54.63
CDY35214	Canola	cytosol	54.59	54.46
CDY06876	Canola	cytosol	54.59	54.46
Bra011055.1-P	Field mustard	cytosol	54.59	54.46
CDX97452	Canola	cytosol	54.59	54.46
CDY72645	Canola	cytosol	43.76	54.39
GSMUA_AchrUn_...	Banana	mitochondrion	50.35	54.31
GSMUA_Achr1P24210_001	Banana	cytosol	48.24	54.09
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	31.53	54.03
OQU87233	Sorghum	cytosol	53.18	53.55
AT4G28720.1	Thale cress	cytosol	53.65	53.52
EES15155	Sorghum	peroxisome	52.71	50.56
OQU93186	Sorghum	cytosol	51.29	50.11
KXG33311	Sorghum	cytosol	51.29	50.0
EES02224	Sorghum	peroxisome	49.65	49.53
EES16059	Sorghum	cytosol	51.53	48.88
OQU79511	Sorghum	cytosol	48.94	46.12
EES08388	Sorghum	extracellular	36.47	42.94
EES08387	Sorghum	extracellular, plasma membrane	37.65	42.55
OQU78863	Sorghum	extracellular	38.35	42.45
KXG32253	Sorghum	cytosol, peroxisome, vacuole	39.06	40.89

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	UniProt:A0A1B6QAS9	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EnsemblPlants:KXG35000	ProteinID:KXG35000
ProteinID:KXG35000.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PANTHER:PTHR43539	PANTHER:PTHR43539:SF20
EnsemblPlantsGene:SORBI_3002G120300	SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI00081AC5DB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:15190143..15192034

Molecular Weight (calculated)

45824.0 Da

IEP (calculated)

7.996

GRAVY (calculated)

0.067

Length

425 amino acids

Sequence
(BLAST)

001: MAAAAAAAAD ASSAEAPPSP PAASRVVWVN GPIVVGAGPA GLSVAACLRA RGVPCVVLDR ADCIASLWQR RTYDRLRLHL PRHFCELPGL PFPDNYPEYP
101: TKRQFVDYLN AYAEQAGVQP RFNQAVTSAR YDAAAGFWRV RADDVVLAED AAAVAAGATT TEYIGRWLVV ATGENAERIV PEFEGAEDFA GPVSHVSEYK
201: SGEAYRGKRV LVVGCGNSGM EVCLDLCDHN ALPSMVVRDA KVHVLPREMF GVATFSVAVF LLRFLPLWLV DAILVLLARL FLGDLDKLGI RRPAGGPLEL
301: KNTRGRTPVL DIGALARIRS GHIQIVPGIK RLFRGGAELV DGRRVAADAV ILATGYQSNV PQWLKGCDFF TQEGYPRVPF PHGWKGESGL YSVGFTRRGL
401: SGVSSDAVKV AQDIAVEWEK QTSTI

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.