CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011764_P001	Maize	cytosol	92.66	88.99
Os01t0732700-01	Rice	cytosol	84.63	83.48
HORVU3Hr1G069580.2	Barley	cytosol	79.36	79.18
TraesCS3B01G314700.1	Wheat	peroxisome	79.13	78.95
TraesCS3D01G280900.1	Wheat	peroxisome	78.67	78.49
TraesCS3A01G280900.1	Wheat	peroxisome	78.44	78.26
VIT_04s0008g03920.t01	Wine grape	cytosol	64.68	67.95
GSMUA_Achr9P05490_001	Banana	cytosol	64.91	67.87
Solyc08g068160.1.1	Tomato	cytosol	62.16	65.94
KRH16221	Soybean	cytosol, nucleus, peroxisome	64.68	64.68
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	64.68	64.53
PGSC0003DMT400037628	Potato	cytosol	61.47	64.27
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	63.76	63.18
KRH04824	Soybean	cytosol, nucleus, peroxisome	63.3	63.01
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	59.4	59.95
AT5G25620.2	Thale cress	cytosol	58.72	58.99
Bra036547.1-P	Field mustard	cytosol	59.63	58.96
CDX80530	Canola	cytosol, nucleus, peroxisome	59.63	58.82
CDY19798	Canola	cytosol, nucleus, peroxisome	59.86	58.39
CDY62422	Canola	cytosol, nucleus, peroxisome	59.17	58.37
CDY54895	Canola	cytosol, nucleus, peroxisome	59.17	58.24
CDY05502	Canola	cytosol, nucleus, peroxisome	58.72	57.79
Bra020509.1-P	Field mustard	cytosol	57.57	57.44
OQU87233	Sorghum	cytosol	53.9	55.69
EES02224	Sorghum	peroxisome	54.36	55.63
EES11777	Sorghum	cytosol, peroxisome, plastid	53.21	54.98
CDX87078	Canola	extracellular	26.83	53.92
OQU79511	Sorghum	cytosol	53.21	51.44
KXG35000	Sorghum	plastid	50.0	51.29
EES16059	Sorghum	cytosol	52.52	51.12
OQU93186	Sorghum	cytosol	50.46	50.57
EES15155	Sorghum	peroxisome	48.17	47.4
EES08388	Sorghum	extracellular	39.22	47.37
EES08387	Sorghum	extracellular, plasma membrane	40.83	47.34
OQU78863	Sorghum	extracellular	41.51	47.14
KXG32253	Sorghum	cytosol, peroxisome, vacuole	40.14	43.1
OQU88910	Sorghum	plastid	18.12	34.8

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	UniProt:A0A1B6Q5W6	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009819	GO:GO:0009851	GO:GO:0009987	GO:GO:0016491	GO:GO:0047134	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EnsemblPlants:KXG33311	ProteinID:KXG33311	ProteinID:KXG33311.1
PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13
InterPro:Pyridine_nuc-diS_OxRdtase_2	EnsemblPlantsGene:SORBI_3003G286500	SUPFAM:SSF51905	UniParc:UPI00081AE7D7	:	:

Description

hypothetical protein

Coordinates

chr3:+:61938943..61960755

Molecular Weight (calculated)

47994.9 Da

IEP (calculated)

8.064

GRAVY (calculated)

-0.074

Length

436 amino acids

Sequence
(BLAST)

001: MDPWSESEGK RAHDPIFKCF SQNHHFKEMS TDAAVALSER CPCIWVSGPI IVGAGPSGLA VAACLKEKGI SSLILERSSC IASLWQLKTY DRLSLHLPRK
101: FCELPLLPFP ANYPIYPSKQ QFVAYLESYA ARFGISPTYN RTVVCAEYDE QLLLWRVRTQ TSGTTGQEVE YLSRWLIVAT GENAEAVQPD IGGLQEFPGT
201: IMHTSAYKSG SAFTGKRVLV VGCGNSGMEV CLDLCNHNAE PHIVVRDAVH ILPREMLGHS TFGLSMWLLK WLPVHVVDRV LLCIAWAMLG DTAQLGLKRP
301: AFGPLELKSL SGKTPVLDVG TFAKIKSGDI KVRPAVRQIS GRVVEFADGG LAEFDAIVLA TGYKSNVPFW LKDRELFSEK DGLPRKAFPN GWKGENGLYS
401: VGFTRRGLMG TSVEARSIAH DIEQQWKAKG THPDAG

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.