CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008255_P001	Maize	plasma membrane	85.47	88.75
TraesCS5B01G216000.1	Wheat	cytosol, peroxisome, plasma membrane	72.91	74.75
TraesCS5A01G217200.1	Wheat	cytosol, peroxisome, plasma membrane	73.15	74.62
Os01t0273800-01	Rice	cytosol	72.66	74.12
TraesCS5D01G225200.1	Wheat	cytosol	72.17	73.62
Zm00001d047670_P001	Maize	cytosol, peroxisome, plastid	37.44	73.43
Os01t0274100-00	Rice	cytosol, peroxisome, plastid	70.94	70.07
HORVU7Hr1G013170.3	Barley	cytosol	63.79	64.91
GSMUA_Achr8P00130_001	Banana	plasma membrane	52.71	60.28
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	47.04	56.01
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	48.77	54.85
VIT_07s0104g01260.t01	Wine grape	plasma membrane	46.31	48.33
KRH68103	Soybean	cytosol	45.32	47.92
VIT_07s0104g01250.t01	Wine grape	extracellular	44.58	47.88
EES08388	Sorghum	extracellular	42.12	47.37
EES08387	Sorghum	extracellular, plasma membrane	43.84	47.34
KRG96368	Soybean	cytosol	44.58	46.41
OQU78863	Sorghum	extracellular	43.84	46.35
Solyc09g074430.2.1	Tomato	cytosol	43.6	45.62
OQU87233	Sorghum	cytosol	44.34	42.65
OQU93186	Sorghum	cytosol	44.34	41.38
EES11777	Sorghum	cytosol, peroxisome, plastid	42.36	40.76
EES02224	Sorghum	peroxisome	42.36	40.38
KXG33311	Sorghum	cytosol	43.1	40.14
KXG35000	Sorghum	plastid	40.89	39.06
EES16059	Sorghum	cytosol	42.36	38.39
EES15155	Sorghum	peroxisome	41.87	38.37
OQU79511	Sorghum	cytosol	41.87	37.69
OQU88910	Sorghum	plastid	16.26	29.07

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	UniProt:A0A1B6Q2V8	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	EnsemblPlants:KXG32253	ProteinID:KXG32253	ProteinID:KXG32253.1	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43539	PANTHER:PTHR43539:SF18	EnsemblPlantsGene:SORBI_3003G128700	SUPFAM:SSF51905
UniParc:UPI00081ABF63	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:11868354..11871577

Molecular Weight (calculated)

43831.6 Da

IEP (calculated)

7.324

GRAVY (calculated)

-0.002

Length

406 amino acids

Sequence
(BLAST)

001: MAAAAAVTTE EDVIIVGAGQ SGLAVAACLS LRGVRALVLE RDDCVGSLWR KRAYDRLHLH LAKKYSALPH APHPDSAPTY LHRDEYAAYL DGYAARFGVR
101: TRLRREVRCA RYDPGAARWE VEAAAAAAGG AGEVVVERYA ARFLVVASGE NAEKFVPEVP GLEAFPGKVM HAAEYRSAEG MQGKAVLVVG SGNSGMEIAY
201: DLAAAGAITS IVVRSELHLV TKEIWNVAMA LSAYLPVWVI DKLVLLMCAV VFGDTSRHGL RRPAVGPFTM KLTTPAYPVV DVGTYAKIRT GEIRVLPAAV
301: KSVRGNVVEF GDGKRHPFDA IVFATGYRST VTHWLKSEDG LIGDDGMAAR SYPEHWKGDN GLYCAGMVRR GIYGSCEDAE LIAGDISKLL LLRPQQEQEQ
401: EQGNGF

Best Arabidopsis Sequence Match ( AT1G48910.1 )
(BLAST)

001: METVVVIVGA GPAGLATSVC LNQHSIPNVI LEKEDIYASL WKKRAYDRLK LHLAKEFCQL PFMPHGREVP TFMSKELFVN YLDAYVARFD INPRYNRTVK
101: SSTFDESNNK WRVVAENTVT GETEVYWSEF LVVATGENGD GNIPMVEGID TFGGEIMHSS EYKSGRDFKD KNVLVVGGGN SGMEISFDLC NFGANTTILI
201: RTPRHVVTKE VIHLGMTLLK YAPVAMVDTL VTTMAKILYG DLSKYGLFRP KQGPFATKLF TGKAPVIDVG TVEKIRDGEI QVINGGIGSI NGKTLTFENG
301: HKQDFDAIVF ATGYKSSVCN WLEDYEYVMK KDGFPKAPMP KHWKGEKNLY CAGFSRKGIA GGAEDAMSVA DDIRSILATL KNN

Arabidopsis Description

YUC10Probable indole-3-pyruvate monooxygenase YUCCA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.