Factsheet for TraesCS5A01G217200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G216000.1	Wheat	cytosol, peroxisome, plasma membrane	96.73	97.22
TraesCS5D01G225200.1	Wheat	cytosol	96.73	96.73
Zm00001d008255_P001	Maize	plasma membrane	74.37	75.7
Os01t0273800-01	Rice	cytosol	75.38	75.38
KXG32253	Sorghum	cytosol, peroxisome, vacuole	74.62	73.15
Os01t0274100-00	Rice	cytosol, peroxisome, plastid	74.12	71.78
TraesCS7A01G065600.1	Wheat	endoplasmic reticulum, extracellular	62.81	63.94
GSMUA_Achr8P00130_001	Banana	plasma membrane	55.28	61.97
Zm00001d047670_P001	Maize	cytosol, peroxisome, plastid	31.91	61.35
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	49.75	58.06
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	51.76	57.06
VIT_07s0104g01260.t01	Wine grape	plasma membrane	48.24	49.36
TraesCS4A01G374300.1	Wheat	extracellular, plastid	46.48	48.43
VIT_07s0104g01250.t01	Wine grape	extracellular	45.73	48.15
TraesCS4A01G374400.1	Wheat	extracellular	31.16	47.88
Solyc09g074430.2.1	Tomato	cytosol	45.98	47.16
TraesCS7A01G076200.1	Wheat	extracellular	45.23	47.12
TraesCS7A01G076100.1	Wheat	endoplasmic reticulum, extracellular, plastid	24.62	46.89
KRH68103	Soybean	cytosol	45.23	46.88
TraesCS7A01G459600.1	Wheat	extracellular	44.47	46.83
TraesCS4A01G325400.3	Wheat	extracellular	44.97	46.61
TraesCS2A01G587200.1	Wheat	extracellular	44.72	46.6
TraesCS7A01G076300.1	Wheat	endoplasmic reticulum, extracellular	44.72	46.6
TraesCS4A01G374200.1	Wheat	extracellular, plastid	44.72	46.6
TraesCS4A01G380000.1	Wheat	extracellular	38.94	46.55
TraesCS7A01G076000.1	Wheat	endoplasmic reticulum, extracellular	29.9	46.48
TraesCS4A01G373500.1	Wheat	plasma membrane	44.72	46.48
TraesCS4A01G379900.1	Wheat	extracellular	44.47	46.34
TraesCS2A01G587400.1	Wheat	extracellular	44.47	46.34
TraesCS7A01G075400.1	Wheat	plasma membrane	44.47	46.21
TraesCS2A01G587500.1	Wheat	extracellular, plastid	44.22	46.07
KRG96368	Soybean	cytosol	44.72	45.64
TraesCS2A01G587600.1	Wheat	extracellular	33.17	45.52
TraesCS2A01G587300.1	Wheat	extracellular, plastid	32.91	45.49
TraesCS4A01G374500.1	Wheat	extracellular, plastid	43.47	45.29
TraesCS4A01G313200.1	Wheat	mitochondrion	44.47	43.17
TraesCS3A01G232600.1	Wheat	cytosol	44.22	43.03
TraesCS5A01G102700.1	Wheat	cytosol	44.47	41.07
TraesCS3A01G280900.1	Wheat	peroxisome	43.97	40.05
TraesCS2A01G011500.1	Wheat	plastid	41.96	39.95
TraesCS4A01G027500.1	Wheat	plastid	41.46	39.57
TraesCS2A01G533200.1	Wheat	mitochondrion	39.45	37.74
TraesCS3A01G149500.1	Wheat	cytosol, peroxisome, plastid	41.71	37.64

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF13738	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF18	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
EnsemblPlantsGene:TraesCS5A01G217200	EnsemblPlants:TraesCS5A01G217200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:-:433782526..433786762

Molecular Weight (calculated)

44072.9 Da

IEP (calculated)

7.688

GRAVY (calculated)

-0.278

Length

398 amino acids

Sequence
(BLAST)

001: MAHAAEGEKP REEEQEHEEE VIIVGAGPSG LAAAACLSLR GVRNLVLERD DCVGSLWRHR TYDRIRLHLA KQHSALPHAP HGPAAPTYLP RDDFVRYLDD
101: YAARFGVRVR LRREVREARF DEARGAWLVE AVDHATGLVE RYAARHLVAA AGENDEKVLP EVPGLDGFPG KVMHACEYRT GKGMEGKAVL VVGSGNSGME
201: IAYDLAEAGA ATSIIVRSEL HLVTKEIWNV AMTLYRYLPL WLIDRIVLFM CSVVFGDTSR YGLRRPAIGP FSMKIHTPAY PVVDVGTYAK IKTGEIQVLP
301: AMKAVHGNVV EFADGKRHPF DAIVFATGYR STTKKWLKSD DGLIGEDGMA RRSFPEHWKG ENGLYCAGMV RRGLYGSCED AESIAEDISK KKKKPHQA

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.