Factsheet for TraesCS4A01G380000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G379900.1	Wheat	extracellular	97.3	84.82
TraesCS7B01G004700.1	Wheat	extracellular	96.4	84.03
TraesCS4A01G374400.1	Wheat	extracellular	65.17	83.78
TraesCS7A01G076000.1	Wheat	endoplasmic reticulum, extracellular	63.66	82.81
TraesCS4A01G374300.1	Wheat	extracellular, plastid	94.89	82.72
TraesCS7A01G076200.1	Wheat	extracellular	94.29	82.2
TraesCS7A01G076300.1	Wheat	endoplasmic reticulum, extracellular	93.69	81.68
TraesCS7A01G459600.1	Wheat	extracellular	92.49	81.48
TraesCS7A01G076100.1	Wheat	endoplasmic reticulum, extracellular, plastid	50.75	80.86
TraesCS4A01G374500.1	Wheat	extracellular, plastid	91.89	80.1
TraesCS4A01G374200.1	Wheat	extracellular, plastid	91.59	79.84
HORVU7Hr1G017660.1	Barley	extracellular	89.49	77.4
TraesCS2A01G587200.1	Wheat	extracellular	87.09	75.92
HORVU7Hr1G017630.2	Barley	extracellular	87.39	75.78
TraesCS2A01G587500.1	Wheat	extracellular, plastid	86.79	75.65
TraesCS2A01G587400.1	Wheat	extracellular	86.49	75.39
TraesCS2A01G587300.1	Wheat	extracellular, plastid	61.86	71.53
TraesCS2A01G587600.1	Wheat	extracellular	61.86	71.03
TraesCS4A01G325400.3	Wheat	extracellular	73.87	64.06
Os11t0207700-00	Rice	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	64.26	55.3
Os11t0207900-00	Rice	endoplasmic reticulum	63.96	55.04
Os02t0272200-00	Rice	extracellular	62.16	53.91
TraesCS7A01G075400.1	Wheat	plasma membrane	60.96	53.0
EES08388	Sorghum	extracellular	57.06	52.63
TraesCS4A01G373500.1	Wheat	plasma membrane	60.06	52.22
EES08387	Sorghum	extracellular, plasma membrane	58.86	52.13
VIT_18s0001g15100.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.35	47.76
VIT_18s0001g15190.t01	Wine grape	cytosol	52.85	46.44
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	46.55	46.13
CDY50238	Canola	cytosol	45.95	45.95
AT1G48910.1	Thale cress	cytosol	52.55	45.69
CDY65511	Canola	cytosol	45.95	45.54
KRH64052	Soybean	vacuole	51.95	45.41
Bra018763.1-P	Field mustard	cytosol, extracellular, peroxisome	34.53	45.1
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	50.75	44.36
Bra018761.1-P	Field mustard	cytosol, extracellular, peroxisome	28.83	43.84
AT1G21430.1	Thale cress	endoplasmic reticulum, extracellular	50.45	42.97
Bra017913.1-P	Field mustard	cytosol	48.65	42.86
CDY40617	Canola	cytosol, extracellular, peroxisome	48.95	42.34
KRH53357	Soybean	extracellular	50.75	42.25
CDX93705	Canola	cytosol, extracellular, peroxisome	48.65	42.08
CDX93703	Canola	cytosol, extracellular, peroxisome	48.65	42.08
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	39.04	40.5
PGSC0003DMT400097007	Potato	cytosol, peroxisome, plastid	45.65	39.38
TraesCS5A01G217200.1	Wheat	cytosol, peroxisome, plasma membrane	46.55	38.94
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	50.45	38.71
PGSC0003DMT400094923	Potato	extracellular	43.24	37.8
PGSC0003DMT400092778	Potato	extracellular, peroxisome, plasma membrane	37.54	37.54
Solyc09g091720.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.94	37.53
Solyc09g091870.1.1	Tomato	golgi	42.34	37.01
TraesCS7A01G065600.1	Wheat	endoplasmic reticulum, extracellular	42.04	35.81
PGSC0003DMT400088054	Potato	cytosol	33.63	35.78
PGSC0003DMT400090184	Potato	cytosol	24.62	35.65
TraesCS4A01G313200.1	Wheat	mitochondrion	41.14	33.41
TraesCS3A01G280900.1	Wheat	peroxisome	42.94	32.72
TraesCS3A01G232600.1	Wheat	cytosol	39.94	32.52
TraesCS2A01G533200.1	Wheat	mitochondrion	40.54	32.45
TraesCS4A01G027500.1	Wheat	plastid	40.54	32.37
TraesCS2A01G011500.1	Wheat	plastid	39.94	31.82
Zm00001d000445_P001	Maize	plasma membrane	60.36	31.46
TraesCS3A01G149500.1	Wheat	cytosol, peroxisome, plastid	40.54	30.61
TraesCS5A01G102700.1	Wheat	cytosol	39.34	30.39
PGSC0003DMT400085760	Potato	cytosol, nucleus, peroxisome	20.12	27.8
Zm00001d049077_P001	Maize	endoplasmic reticulum, plasma membrane	60.06	25.35

Protein Annotations

EnsemblPlants:TraesCS4A01G380000.1	EnsemblPlantsGene:TraesCS4A01G380000	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	PANTHER:PTHR43539
PANTHER:PTHR43539:SF9	PFAM:PF13738	SEG:seg	SUPFAM:SSF51905	TMHMM:TMhelix	MapMan:11.2.1.1.2

Description

No Description!

Coordinates

chr4A:+:657367531..657369181

Molecular Weight (calculated)

36657.7 Da

IEP (calculated)

8.547

GRAVY (calculated)

0.073

Length

333 amino acids

Sequence
(BLAST)

001: MENVVVLIVG AGPAGLATAA CLSQFSIPYV IVERESCSAS LWRNRAYDRL KLHLAKEFCE LPHMSYPLDA PTYIPKTLFV KYLDDYVEHF NIQPKYLTSV
101: ESSTFDNEEK CWSIMAHDMA KSTIVRFTAK FLVVASGENS AENIPMIPGL QSFPGDVIHS SKISYDLVAH GANTSIIIRS PIHVMTKELI RLGMTLARRL
201: PLNLVDTLLV MAANLIFGDL SRYGIRRPKM GPMVQGSISK IMGDIVEFQC SKKISFDAIV FATGYKSTSN IWLKNGENML NGNGLPIKEY PNHWKGENGL
301: YCAGLGRRGL AGIAVDAKNI ASDIKSVIGT MSG

Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)

001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K

Arabidopsis Description

YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.