Factsheet for PGSC0003DMT400085760

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088054	Potato	cytosol	71.37	54.95
PGSC0003DMT400094923	Potato	extracellular	80.5	50.92
PGSC0003DMT400090184	Potato	cytosol	48.55	50.87
PGSC0003DMT400092778	Potato	extracellular, peroxisome, plasma membrane	65.98	47.75
Solyc09g091720.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	74.27	46.98
PGSC0003DMT400097007	Potato	cytosol, peroxisome, plastid	68.05	42.49
Bra018763.1-P	Field mustard	cytosol, extracellular, peroxisome	35.27	33.33
TraesCS2A01G587300.1	Wheat	extracellular, plastid	39.83	33.33
TraesCS2A01G587600.1	Wheat	extracellular	39.42	32.76
TraesCS2D01G566200.1	Wheat	plasma membrane, plastid	38.59	32.29
Bra018761.1-P	Field mustard	cytosol, extracellular, peroxisome	28.22	31.05
TraesCS2D01G565900.1	Wheat	cytosol, nucleus, peroxisome	40.66	30.72
TraesCSU01G186300.1	Wheat	endoplasmic reticulum, plastid	40.25	29.85
TraesCS4A01G374400.1	Wheat	extracellular	31.54	29.34
TraesCS6B01G033700.1	Wheat	plasma membrane	39.42	29.32
TraesCSU01G038800.1	Wheat	endoplasmic reticulum, extracellular, plastid	39.42	29.23
HORVU0Hr1G000290.1	Barley	extracellular	40.25	28.96
HORVU7Hr1G023900.1	Barley	endoplasmic reticulum, extracellular, plastid	24.07	28.86
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	45.23	28.61
TraesCS7A01G076100.1	Wheat	endoplasmic reticulum, extracellular, plastid	24.48	28.23
TraesCS7A01G076000.1	Wheat	endoplasmic reticulum, extracellular	29.88	28.12
KRH64052	Soybean	vacuole	44.4	28.08
EES08387	Sorghum	extracellular, plasma membrane	43.15	27.66
OQU78863	Sorghum	extracellular	43.98	27.6
CDX93705	Canola	cytosol, extracellular, peroxisome	43.98	27.53
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	36.51	27.41
CDY40617	Canola	cytosol, extracellular, peroxisome	43.57	27.27
HORVU1Hr1G078200.2	Barley	endoplasmic reticulum, extracellular	42.74	27.18
EES08388	Sorghum	extracellular	40.66	27.15
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	37.76	27.08
CDX93703	Canola	cytosol, extracellular, peroxisome	43.15	27.01
HORVU0Hr1G001150.2	Barley	plasma membrane	42.74	26.96
HORVU0Hr1G031640.2	Barley	plasma membrane	42.74	26.96
HORVU1Hr1G067720.2	Barley	plasma membrane	42.74	26.96
TraesCS7A01G075400.1	Wheat	plasma membrane	42.32	26.63
TraesCS7D01G070900.1	Wheat	extracellular, plasma membrane	42.32	26.63
GSMUA_Achr6P17640_001	Banana	plastid	35.68	26.54
TraesCS7D01G071900.1	Wheat	cytosol	23.24	26.54
TraesCS5B01G538300.1	Wheat	extracellular	41.91	26.44
HORVU6Hr1G019210.2	Barley	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	41.91	26.44
TraesCS4A01G373500.1	Wheat	plasma membrane	41.91	26.37
HORVU7Hr1G023910.1	Barley	endoplasmic reticulum, extracellular, plastid	41.49	26.18
TraesCS2A01G587200.1	Wheat	extracellular	41.49	26.18
HORVU7Hr1G017620.2	Barley	plasma membrane	41.91	26.1
TraesCS2D01G566100.1	Wheat	plasma membrane	41.08	25.92
TraesCS5D01G556600.1	Wheat	plasma membrane	41.08	25.92
TraesCS2A01G587400.1	Wheat	extracellular	41.08	25.92
TraesCS2B01G595800.1	Wheat	endoplasmic reticulum, plastid	40.66	25.65
TraesCS7D01G071800.1	Wheat	extracellular, plastid	40.66	25.65
TraesCS2B01G596000.1	Wheat	endoplasmic reticulum, plastid	40.66	25.65
TraesCS2A01G587500.1	Wheat	extracellular, plastid	40.66	25.65
TraesCS2B01G595700.1	Wheat	endoplasmic reticulum, plastid	40.66	25.65
AT1G48910.1	Thale cress	cytosol	40.66	25.59
TraesCS4A01G325400.3	Wheat	extracellular	40.66	25.52
TraesCS7A01G076300.1	Wheat	endoplasmic reticulum, extracellular	40.25	25.39
TraesCS2B01G596100.1	Wheat	extracellular	40.25	25.39
TraesCS7A01G076200.1	Wheat	extracellular	40.25	25.39
Zm00001d023718_P002	Maize	extracellular, vacuole	41.91	25.31
HORVU7Hr1G017660.1	Barley	extracellular	40.25	25.19
TraesCS7A01G459600.1	Wheat	extracellular	39.42	25.13
HORVU1Hr1G022670.1	Barley	extracellular	39.83	25.13
TraesCS7D01G071500.1	Wheat	extracellular, plastid	39.83	25.13
TraesCS4A01G374200.1	Wheat	extracellular, plastid	39.83	25.13
TraesCS4A01G374300.1	Wheat	extracellular, plastid	39.83	25.13
TraesCS7B01G004700.1	Wheat	extracellular	39.83	25.13
HORVU1Hr1G022530.34	Barley	extracellular	39.83	25.13
TraesCS2B01G596200.1	Wheat	plastid	39.83	25.13
TraesCS7D01G071400.1	Wheat	extracellular	39.42	24.87
TraesCS2B01G601800.1	Wheat	extracellular	39.42	24.87
HORVU7Hr1G017680.1	Barley	extracellular	39.42	24.87
TraesCS4A01G379900.1	Wheat	extracellular	39.42	24.87
TraesCS2B01G600600.1	Wheat	extracellular	39.42	24.87
PGSC0003DMT400067103	Potato	cytosol	34.44	24.85
HORVU7Hr1G017630.2	Barley	extracellular	39.42	24.74
TraesCS7D01G072000.1	Wheat	endoplasmic reticulum, extracellular	39.0	24.61
Os12t0189500-00	Rice	peroxisome, plasma membrane, plastid	42.32	24.34
TraesCS4A01G374500.1	Wheat	extracellular, plastid	37.76	23.82
Os11t0207900-00	Rice	endoplasmic reticulum	38.17	23.77
Os11t0207700-00	Rice	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	38.17	23.77
TraesCS2D01G565800.1	Wheat	endoplasmic reticulum	25.31	23.19
Os02t0272200-00	Rice	extracellular	36.93	23.18
PGSC0003DMT400051713	Potato	cytosol	39.42	22.84
PGSC0003DMT400038139	Potato	peroxisome	38.59	22.79
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	37.76	21.93
PGSC0003DMT400037628	Potato	cytosol	37.76	21.82
PGSC0003DMT400030255	Potato	cytosol	35.27	20.29
TraesCS4A01G380000.1	Wheat	extracellular	27.8	20.12
TraesCS2B01G595900.1	Wheat	endoplasmic reticulum, extracellular, plastid	23.65	19.45
Zm00001d000445_P001	Maize	plasma membrane	43.15	16.28
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	15.35	14.92
TraesCS2D01G566000.1	Wheat	plastid	41.49	13.68
Zm00001d049077_P001	Maize	endoplasmic reticulum, plasma membrane	43.57	13.31

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	UniProt:M1DA77
PFAM:PF00743	EnsemblPlantsGene:PGSC0003DMG400035331	PGSC:PGSC0003DMG400035331	EnsemblPlants:PGSC0003DMT400085760	PANTHER:PTHR43539	PANTHER:PTHR43539:SF12
SUPFAM:SSF51905	UniParc:UPI0002962C1D	:	:	:	:

Description

Flavin-containing monooxygenase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400035331]

Coordinates

chr7:-:31994472..31996658

Molecular Weight (calculated)

27305.8 Da

IEP (calculated)

7.606

GRAVY (calculated)

-0.280

Length

241 amino acids

Sequence
(BLAST)

001: MPHATSSTKY MPKKEFIQYL DEYVEHLNIK PKFQTCVESA FYYSGEMKWT VKSRNLTSGK IEIYASDFLI LATVENNEGY IPNMIGIENF KGEIIHSSDY
101: RSGEKYKDKK VLVVGSGNSG MEIAFDLSNY ESQTSFFVRS RIHVLTKDMV YTAMLLPKYL PISLVDTVTT KCTKFKFGNF EELGIPQPEE GPFSVKRSKG
201: RSTVIDVGVI DNIKLGQIKA HITSSNLITT KNIAVVFNEE E

Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)

001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K

Arabidopsis Description

YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [extracellular,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.