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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytoskeleton, peroxisome, secretory
iPSORT:secretory
MultiLoc:peroxisome
TargetP:secretory
WoLF PSORT:cytoskeleton
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G022530.34 Barley extracellular 92.24 80.89
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 48.06 80.1
HORVU1Hr1G022670.1 Barley extracellular 88.66 77.75
HORVU7Hr1G017680.1 Barley extracellular 85.37 74.87
HORVU7Hr1G017660.1 Barley extracellular 85.07 74.03
HORVU7Hr1G017630.2 Barley extracellular 83.58 72.92
HORVU7Hr1G023910.1 Barley endoplasmic reticulum, extracellular, plastid 80.9 70.94
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 75.22 65.97
HORVU1Hr1G067720.2 Barley plasma membrane 72.54 63.61
HORVU0Hr1G031640.2 Barley plasma membrane 72.54 63.61
HORVU0Hr1G001150.2 Barley plasma membrane 72.54 63.61
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 71.94 63.59
Os11t0207700-00 Rice endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 64.18 55.56
HORVU7Hr1G017620.2 Barley plasma membrane 63.28 54.78
Os11t0207900-00 Rice endoplasmic reticulum 63.28 54.78
EES08388 Sorghum extracellular 58.81 54.57
EES08387 Sorghum extracellular, plasma membrane 60.6 53.99
Os02t0272200-00 Rice extracellular 61.79 53.91
GSMUA_Achr3P10910_001 Banana endoplasmic reticulum, golgi, vacuole 50.75 50.6
GSMUA_Achr3P10900_001 Banana cytosol, peroxisome, plasma membrane 48.36 50.47
Bra018761.1-P Field mustard cytosol, extracellular, peroxisome 32.84 50.23
Bra018763.1-P Field mustard cytosol, extracellular, peroxisome 38.21 50.2
VIT_18s0001g15100.t01 Wine grape cytosol, peroxisome, plasma membrane 53.73 47.49
KRH64052 Soybean vacuole 52.54 46.19
VIT_18s0001g15190.t01 Wine grape cytosol 51.94 45.91
AT1G48910.1 Thale cress cytosol 51.94 45.43
KRH53890 Soybean cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 50.75 44.62
Bra017913.1-P Field mustard cytosol 48.66 43.12
CDX93703 Canola cytosol, extracellular, peroxisome 49.25 42.86
CDY40617 Canola cytosol, extracellular, peroxisome 48.96 42.6
AT1G21430.1 Thale cress endoplasmic reticulum, extracellular 49.55 42.46
CDX93705 Canola cytosol, extracellular, peroxisome 48.66 42.34
KRH53357 Soybean extracellular 50.15 42.0
CDY65511 Canola cytosol 41.79 41.67
CDY50238 Canola cytosol 41.19 41.44
PGSC0003DMT400085760 Potato cytosol, nucleus, peroxisome 28.96 40.25
PGSC0003DMT400097007 Potato cytosol, peroxisome, plastid 45.97 39.9
Solyc09g091870.1.1 Tomato golgi 45.37 39.9
PGSC0003DMT400094923 Potato extracellular 45.07 39.63
KRH64572 Soybean cytosol, endoplasmic reticulum, peroxisome 51.04 39.4
Solyc09g091720.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 44.78 39.37
PGSC0003DMT400092778 Potato extracellular, peroxisome, plasma membrane 38.81 39.04
PGSC0003DMT400088054 Potato cytosol 35.82 38.34
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 39.1 37.86
PGSC0003DMT400090184 Potato cytosol 25.97 37.83
HORVU4Hr1G073700.1 Barley cytosol 42.39 34.22
HORVU7Hr1G013170.3 Barley cytosol 40.3 33.83
HORVU3Hr1G069580.2 Barley cytosol 43.28 33.18
HORVU3Hr1G057950.1 Barley cytosol 39.7 32.76
HORVU3Hr1G030390.2 Barley cytosol 43.28 32.73
Zm00001d000445_P001 Maize plasma membrane 60.9 31.92
HORVU5Hr1G125560.2 Barley mitochondrion 39.4 31.88
HORVU2Hr1G001820.1 Barley plastid 40.9 29.09
HORVU5Hr1G028100.1 Barley golgi, mitochondrion, peroxisome 30.45 28.73
HORVU2Hr1G116980.1 Barley plastid 40.9 28.66
Zm00001d049077_P001 Maize endoplasmic reticulum, plasma membrane 61.19 25.98
HORVU7Hr1G007860.1 Barley cytosol 37.01 14.92
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60UniProt:A0A287DTM6InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114EnsemblPlantsGene:HORVU0Hr1G000290EnsemblPlants:HORVU0Hr1G000290.1
InterPro:IPR036188PFAM:PF13738PIRSF:PIRSF000332PRINTS:PR00368PRINTS:PR00469PANTHER:PTHR43539
PANTHER:PTHR43539:SF21InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI000B480CB8SEG:seg:
Description
No Description!
Coordinates
chrchrUn:+:1366412..1368016
Molecular Weight (calculated)
36428.3 Da
IEP (calculated)
6.780
GRAVY (calculated)
0.149
Length
335 amino acids
Sequence
(BLAST)
001: MENVAMLIVG AGPAGLATAA CLSKFSIPYV IVEREDCSAS LWREHAYDHL KLHLAKEFCE LPHMSYPVDA PTSIPKNIFL KYLDDYIECF NILPKYLTNV
101: ESSTYDDDKK CWSIVAHDMA TSIIVKCTTK FLVVASGENS AENIPMIIGL QSFPGDVIHS SSYKSGKSYS GKNVLVVGSG NSGMEIAYDL ATHGANTSII
201: IRSPIHVMTK ELIRLGMTLA HRLPLNLVDN LLAISAKFIF GDLSRQGITR PKMGPLTLKS ATGKSAVIDV GTVGLIKKGI IEVQGGISKI MGNIVEFQCS
301: KEISFDVIVF ATGYKSTTNI WLENGESMLN GNELP
Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)
001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K
Arabidopsis Description
YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.