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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, plastid

Predictor Summary:
  • extracellular 3
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plastid
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:plastid
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 48.69 92.54
HORVU7Hr1G017680.1 Barley extracellular 85.6 85.6
TraesCS2A01G587600.1 Wheat extracellular 64.92 85.52
TraesCS2D01G566100.1 Wheat plasma membrane 85.34 85.34
TraesCS2A01G587500.1 Wheat extracellular, plastid 85.08 85.08
TraesCS2A01G587300.1 Wheat extracellular, plastid 63.87 84.72
TraesCS2A01G587200.1 Wheat extracellular 84.56 84.56
TraesCS2A01G587400.1 Wheat extracellular 84.56 84.56
TraesCS2D01G565800.1 Wheat endoplasmic reticulum 58.12 84.41
TraesCS2D01G566200.1 Wheat plasma membrane, plastid 63.61 84.38
TraesCSU01G038800.1 Wheat endoplasmic reticulum, extracellular, plastid 71.73 84.31
HORVU1Hr1G022530.34 Barley extracellular 84.29 84.29
TraesCS2B01G595700.1 Wheat endoplasmic reticulum, plastid 84.03 84.03
TraesCS2B01G596000.1 Wheat endoplasmic reticulum, plastid 84.03 84.03
HORVU7Hr1G017660.1 Barley extracellular 84.56 83.9
TraesCS2D01G565900.1 Wheat cytosol, nucleus, peroxisome 69.9 83.7
TraesCS2B01G595800.1 Wheat endoplasmic reticulum, plastid 83.51 83.51
TraesCSU01G186300.1 Wheat endoplasmic reticulum, plastid 70.94 83.38
TraesCS2B01G596100.1 Wheat extracellular 82.98 82.98
TraesCS2B01G595900.1 Wheat endoplasmic reticulum, extracellular, plastid 63.61 82.94
HORVU7Hr1G017630.2 Barley extracellular 82.72 82.29
TraesCS2B01G596200.1 Wheat plastid 81.41 81.41
HORVU0Hr1G000290.1 Barley extracellular 70.94 80.9
HORVU1Hr1G022670.1 Barley extracellular 80.89 80.89
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 75.13 75.13
HORVU0Hr1G031640.2 Barley plasma membrane 74.35 74.35
HORVU0Hr1G001150.2 Barley plasma membrane 74.35 74.35
HORVU1Hr1G067720.2 Barley plasma membrane 74.08 74.08
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 70.68 71.24
Os11t0207700-00 Rice endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 65.44 64.6
Os11t0207900-00 Rice endoplasmic reticulum 64.4 63.57
Os02t0272200-00 Rice extracellular 62.04 61.72
EES08388 Sorghum extracellular 57.59 60.94
EES08387 Sorghum extracellular, plasma membrane 59.16 60.11
HORVU7Hr1G017620.2 Barley plasma membrane 60.47 59.69
GSMUA_Achr3P10910_001 Banana endoplasmic reticulum, golgi, vacuole 48.69 55.36
VIT_18s0001g15100.t01 Wine grape cytosol, peroxisome, plasma membrane 54.45 54.88
KRH64052 Soybean vacuole 53.4 53.54
VIT_18s0001g15190.t01 Wine grape cytosol 52.88 53.3
KRH53890 Soybean cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 52.09 52.23
GSMUA_Achr3P10900_001 Banana cytosol, peroxisome, plasma membrane 43.19 51.4
AT1G48910.1 Thale cress cytosol 51.05 50.91
Bra017913.1-P Field mustard cytosol 48.43 48.94
Bra018761.1-P Field mustard cytosol, extracellular, peroxisome 28.01 48.86
CDY50238 Canola cytosol 42.15 48.35
Bra018763.1-P Field mustard cytosol, extracellular, peroxisome 32.2 48.24
CDY65511 Canola cytosol 42.41 48.21
AT1G21430.1 Thale cress endoplasmic reticulum, extracellular 49.21 48.08
CDX93705 Canola cytosol, extracellular, peroxisome 48.43 48.05
CDY40617 Canola cytosol, extracellular, peroxisome 48.43 48.05
CDX93703 Canola cytosol, extracellular, peroxisome 48.17 47.79
PGSC0003DMT400090184 Potato cytosol 28.53 47.39
KRH53357 Soybean extracellular 49.48 47.25
PGSC0003DMT400092778 Potato extracellular, peroxisome, plasma membrane 40.58 46.55
PGSC0003DMT400097007 Potato cytosol, peroxisome, plastid 46.6 46.11
PGSC0003DMT400094923 Potato extracellular 45.55 45.67
PGSC0003DMT400088054 Potato cytosol 37.17 45.37
Solyc09g091870.1.1 Tomato golgi 44.76 44.88
Solyc09g091720.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 44.76 44.88
KRH64572 Soybean cytosol, endoplasmic reticulum, peroxisome 50.0 44.01
TraesCS2D01G566000.1 Wheat plastid 81.68 42.68
PGSC0003DMT400085760 Potato cytosol, nucleus, peroxisome 26.18 41.49
HORVU7Hr1G013170.3 Barley cytosol 41.88 40.1
HORVU4Hr1G073700.1 Barley cytosol 41.88 38.55
HORVU3Hr1G057950.1 Barley cytosol 40.84 38.42
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 34.55 38.15
HORVU3Hr1G030390.2 Barley cytosol 43.72 37.7
HORVU3Hr1G069580.2 Barley cytosol 42.93 37.53
HORVU5Hr1G125560.2 Barley mitochondrion 39.79 36.72
Zm00001d000445_P001 Maize plasma membrane 60.47 36.15
HORVU5Hr1G028100.1 Barley golgi, mitochondrion, peroxisome 31.41 33.8
HORVU2Hr1G116980.1 Barley plastid 42.15 33.68
HORVU2Hr1G001820.1 Barley plastid 40.84 33.12
Zm00001d049077_P001 Maize endoplasmic reticulum, plasma membrane 60.47 29.28
HORVU7Hr1G007860.1 Barley cytosol 37.43 17.21
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60UniProt:A0A287VQ87InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114EnsemblPlantsGene:HORVU7Hr1G023910EnsemblPlants:HORVU7Hr1G023910.1
InterPro:IPR036188PFAM:PF13738PIRSF:PIRSF000332PRINTS:PR00368PRINTS:PR00469PANTHER:PTHR43539
PANTHER:PTHR43539:SF9InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI000B474EFESEG:seg:
Description
No Description!
Coordinates
chrchr7H:-:37532600..37534197
Molecular Weight (calculated)
41746.7 Da
IEP (calculated)
9.121
GRAVY (calculated)
-0.051
Length
382 amino acids
Sequence
(BLAST)
001: MENVVVLIVG AGPSGLSIAA CLSQLSIPYV KLERESCSAS LSRNRAYDRL KLDLAKEFCE LPHMSYPVDA PTYIPKALFV KYLDDYVERF NICPKYHTSV
101: ESSTYDNDKK CWSIVAKDMA KCTTIKFTAK FLVVASGENS AENIPTIPGL ESFSGEIIHS SSYKSGKSYF GKNVLVVGSG NSGMEIAYDL ATHGANTSII
201: IRSQIHVMTK ELIRLGMTLA HRLPLNLVDN ILVMAANFIF GDLSRHGITR PKMGPMALKS KTGRSAVIDV GTVGLIKKGK IEVQGCTNKI FGNIVEFKCG
301: KKISFDMIVF ETGYKSTTNI WLKNGESMLN DNGLPIKEYQ NHWKGENGLY CAGLARRGFA GIAADAKNTA NDIKSMIGSM SS
Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)
001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K
Arabidopsis Description
YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.