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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:mitochondrion
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G125560.2 Barley mitochondrion 97.98 81.88
TraesCS4A01G313200.1 Wheat mitochondrion 93.35 78.78
TraesCS5B01G566700.1 Wheat golgi, mitochondrion, plasma membrane 93.06 68.51
Zm00001d005439_P001 Maize plastid 75.72 65.83
Os07t0437000-01 Rice mitochondrion 74.57 64.82
KXG35000 Sorghum plastid 75.14 61.18
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 54.62 52.07
CDY14900 Canola cytosol 58.38 52.06
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 59.83 51.88
GSMUA_Achr11P... Banana cytosol 52.02 51.58
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 50.29 51.48
GSMUA_Achr1P03360_001 Banana peroxisome 50.87 51.16
CDX89837 Canola cytosol, peroxisome, plastid 61.85 50.95
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 61.56 50.71
CDY18209 Canola cytosol, peroxisome, plastid 61.27 50.24
AT1G04180.1 Thale cress cytosol 60.69 49.88
CDY32533 Canola cytosol 60.69 49.76
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 54.62 49.74
CDY10073 Canola cytosol, peroxisome, plastid 60.4 49.64
Bra032524.1-P Field mustard cytosol 60.4 49.53
GSMUA_Achr4P25050_001 Banana cytosol 54.05 49.47
KRG95789 Soybean cytosol, peroxisome, plastid 60.4 49.29
VIT_07s0005g04800.t01 Wine grape cytosol 60.12 49.06
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 59.83 48.94
CDY14230 Canola cytosol 56.07 48.87
Solyc09g064160.2.1 Tomato cytosol 58.38 48.67
CDX94734 Canola cytosol, peroxisome, plastid 59.83 48.59
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 59.83 48.59
KRH32274 Soybean cytosol 59.25 48.46
CDY22326 Canola cytosol 59.54 48.36
KRH67507 Soybean cytosol, peroxisome, plastid 59.25 48.35
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 57.51 47.95
Bra010354.1-P Field mustard cytosol 58.96 47.89
CDX97452 Canola cytosol 58.96 47.89
CDY69333 Canola cytosol 57.51 47.72
AT5G43890.1 Thale cress cytosol 58.38 47.64
HORVU3Hr1G057950.1 Barley cytosol 55.78 47.54
Solyc06g083700.2.1 Tomato cytosol 56.94 47.36
PGSC0003DMT400051713 Potato cytosol 56.94 47.36
AT4G28720.1 Thale cress cytosol 58.09 47.18
CDY06876 Canola cytosol 58.09 47.18
Bra011055.1-P Field mustard cytosol 58.09 47.18
CDY35214 Canola cytosol 58.09 47.18
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 33.81 47.18
Bra032499.1-P Field mustard cytosol 57.51 47.16
GSMUA_AchrUn_... Banana mitochondrion 53.47 46.95
PGSC0003DMT400038139 Potato peroxisome 55.2 46.81
VIT_05s0051g00060.t01 Wine grape peroxisome, plastid 59.25 46.8
PGSC0003DMT400030255 Potato cytosol 56.36 46.54
HORVU2Hr1G001820.1 Barley plastid 63.01 46.28
CDY53200 Canola golgi, peroxisome, plastid 57.51 46.28
KRH33524 Soybean cytosol, peroxisome, plastid 58.96 46.26
Solyc06g008050.2.1 Tomato peroxisome 54.91 46.23
AT2G33230.1 Thale cress plastid 57.51 46.17
CDY61147 Canola plastid 58.09 46.1
CDX89807 Canola plastid 58.09 46.1
Bra015334.1-P Field mustard plastid 58.09 46.1
CDY17153 Canola peroxisome 57.8 45.87
KRG90286 Soybean cytosol, peroxisome, plastid 58.09 45.79
GSMUA_Achr2P04250_001 Banana cytosol 50.0 45.65
HORVU5Hr1G028100.1 Barley golgi, mitochondrion, peroxisome 46.82 45.63
GSMUA_Achr11P... Banana cytosol, mitochondrion 49.71 45.62
CDY72645 Canola cytosol 45.09 45.61
HORVU4Hr1G073700.1 Barley cytosol 54.62 45.54
CDY19472 Canola cytosol, peroxisome, plastid 57.23 45.41
Bra005513.1-P Field mustard cytosol, peroxisome, plastid 57.23 45.41
AT1G04610.1 Thale cress cytosol 57.23 45.31
Solyc09g091090.1.1 Tomato peroxisome 56.36 45.24
GSMUA_Achr1P24210_001 Banana cytosol 49.42 45.12
HORVU3Hr1G069580.2 Barley cytosol 56.94 45.08
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 25.72 44.28
HORVU2Hr1G116980.1 Barley plastid 60.12 43.51
Zm00001d019527_P005 Maize peroxisome 50.58 40.7
OQU88910 Sorghum plastid 26.01 39.65
HORVU0Hr1G000290.1 Barley extracellular 37.86 39.1
HORVU3Hr1G030390.2 Barley cytosol 49.71 38.83
HORVU7Hr1G013170.3 Barley cytosol 43.06 37.34
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 39.88 36.41
HORVU1Hr1G022530.34 Barley extracellular 39.88 36.13
HORVU7Hr1G017680.1 Barley extracellular 39.6 35.86
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.31 35.6
HORVU1Hr1G022670.1 Barley extracellular 39.31 35.6
HORVU7Hr1G017620.2 Barley plasma membrane 39.31 35.14
HORVU7Hr1G017660.1 Barley extracellular 39.02 35.06
HORVU7Hr1G017630.2 Barley extracellular 38.44 34.64
HORVU7Hr1G023910.1 Barley endoplasmic reticulum, extracellular, plastid 38.15 34.55
HORVU1Hr1G067720.2 Barley plasma membrane 37.86 34.29
HORVU0Hr1G031640.2 Barley plasma membrane 37.86 34.29
HORVU0Hr1G001150.2 Barley plasma membrane 37.86 34.29
HORVU7Hr1G007860.1 Barley cytosol 51.16 21.3
Protein Annotations
MapMan:11.2.1.1.2UniProt:A0A287R614InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0050660GO:GO:0050661GO:GO:0055114EnsemblPlantsGene:HORVU5Hr1G050630EnsemblPlants:HORVU5Hr1G050630.3InterPro:IPR036188
PFAM:PF13738PIRSF:PIRSF000332PRINTS:PR00368PRINTS:PR00469PFscan:PS51257PANTHER:PTHR43539
PANTHER:PTHR43539:SF20InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI000B484FBASEG:seg:
Description
No Description!
Coordinates
chrchr5H:-:394506249..394507299
Molecular Weight (calculated)
37790.1 Da
IEP (calculated)
9.183
GRAVY (calculated)
0.048
Length
346 amino acids
Sequence
(BLAST)
001: MMASRTMWVN GPIIVGAGPA GIAAAACLHT RGVPSVVLDR DDCLASLWQR RTYDRLRLHL PKHFCQLPGM PFPDHYPEYP TKHQFVAYLQ SYAAAFHVHP
101: RFRQSVVSAR FDHAAGLWRV QASDQDTGIT TEYIGRWLVV ATGENAERVI PDLDGADSFK GPVTHVSEYK SGEPYKGKRV LVVGCGNSGM EVCLDLCDHG
201: ARPSMVVRDG VHVLPREMLG VATFSVAVFL LRFLPLRVVD RLLVLLAGLF LGGDLARLGL RRPSHGGPLE LKNSKGRTPV LDIGALEKIR AGDIKIVPGV
301: KRLEAGGAEL VDGRFVAADA VILATGYHSN VPQWLKVTNL IMHTPT
Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)
001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A
Arabidopsis Description
YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.