Factsheet for Bra010354.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra012567.1-P
Bra013361.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	Bra012567.1-P	AT4G19030.1	21798944
AT4G28720.1	Bra013361.1-P	AT4G19030.1	21798944
AT4G28720.1	Bra002403.1-P	AT5G22290.1	21798944
AT4G28720.1	Bra006619.1-P	AT5G22290.1	21798944
AT4G28720.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72645	Canola	cytosol	79.81	99.42
CDY14230	Canola	cytosol	90.85	97.48
CDX97452	Canola	cytosol	97.42	97.42
Bra011055.1-P	Field mustard	cytosol	92.72	92.72
AT4G28720.1	Thale cress	cytosol	90.14	90.14
KRH67507	Soybean	cytosol, peroxisome, plastid	76.29	76.65
KRG95789	Soybean	cytosol, peroxisome, plastid	76.29	76.65
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	74.41	74.94
KRH32274	Soybean	cytosol	74.18	74.7
VIT_07s0005g04800.t01	Wine grape	cytosol	73.94	74.29
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	69.25	73.93
Solyc06g083700.2.1	Tomato	cytosol	71.6	73.32
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	73.24	73.24
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	72.07	73.1
PGSC0003DMT400051713	Potato	cytosol	71.36	73.08
Bra032524.1-P	Field mustard	cytosol	71.6	72.27
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	69.95	71.81
PGSC0003DMT400038139	Potato	peroxisome	68.54	71.57
Solyc09g064160.2.1	Tomato	cytosol	69.72	71.57
Solyc06g008050.2.1	Tomato	peroxisome	68.54	71.05
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	54.69	68.93
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	58.22	68.32
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	59.86	67.11
GSMUA_Achr11P...	Banana	cytosol	54.93	67.05
GSMUA_Achr1P03360_001	Banana	peroxisome	53.29	65.99
Bra032499.1-P	Field mustard	cytosol	65.02	65.64
TraesCS2A01G011500.1	Wheat	plastid	63.85	65.07
Os04t0128900-01	Rice	peroxisome	63.62	64.68
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	63.85	64.61
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	63.85	64.61
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	63.62	64.37
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	65.49	63.99
Bra015334.1-P	Field mustard	plastid	65.49	63.99
EES11777	Sorghum	cytosol, peroxisome, plastid	63.38	63.98
GSMUA_Achr4P25050_001	Banana	cytosol	56.34	63.49
GSMUA_Achr1P24210_001	Banana	cytosol	56.1	63.06
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	36.38	62.5
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	55.16	62.33
GSMUA_AchrUn_...	Banana	mitochondrion	57.28	61.93
GSMUA_Achr2P04250_001	Banana	cytosol	54.93	61.74
Os07t0437000-01	Rice	mitochondrion	56.57	60.55
TraesCS2A01G533200.1	Wheat	mitochondrion	57.98	59.38
TraesCS2B01G562800.1	Wheat	mitochondrion	57.75	59.13
Zm00001d005439_P001	Maize	plastid	55.16	59.05
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	47.89	58.96
TraesCS2D01G535100.1	Wheat	mitochondrion	57.28	58.65
HORVU2Hr1G001820.1	Barley	plastid	63.15	57.11
TraesCS4A01G313200.1	Wheat	mitochondrion	54.93	57.07
HORVU5Hr1G125560.2	Barley	mitochondrion	55.16	56.76
Bra008971.1-P	Field mustard	cytosol	54.23	56.2
KXG35000	Sorghum	plastid	54.93	55.06
Bra023318.1-P	Field mustard	plastid	52.82	54.74
Bra040081.1-P	Field mustard	plastid	52.58	54.63
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	57.51	53.73
Bra011354.1-P	Field mustard	cytosol	52.11	53.11
Bra036547.1-P	Field mustard	cytosol	53.76	51.93
Zm00001d005602_P001	Maize	endoplasmic reticulum	24.88	51.71
HORVU2Hr1G116980.1	Barley	plastid	57.98	51.67
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	52.35	51.62
Bra020509.1-P	Field mustard	cytosol	52.58	51.26
EES15155	Sorghum	peroxisome	51.88	49.89
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	54.93	49.79
Bra017913.1-P	Field mustard	cytosol	42.25	47.62
Bra018761.1-P	Field mustard	cytosol, extracellular, peroxisome	24.41	47.49
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	24.18	47.25
Bra018763.1-P	Field mustard	cytosol, extracellular, peroxisome	27.23	45.49
OQU88910	Sorghum	plastid	21.13	39.65
Zm00001d019527_P005	Maize	peroxisome	38.03	37.67
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	50.47	26.38
HORVU7Hr1G007860.1	Barley	cytosol	50.23	25.75

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra010354	EnsemblPlants:Bra010354.1	EnsemblPlants:Bra010354.1-P	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
UniProt:M4D1K4	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI000254548A	:

Description

AT4G28720 (E=5e-229) | flavin-containing monooxygenase family protein / FMO family protein

Coordinates

chrA08:-:14041574..14043048

Molecular Weight (calculated)

47874.0 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.211

Length

426 amino acids

Sequence
(BLAST)

001: MESMFRLMDQ EQEVTTTTNR CIWVNGPVIV GAGPSGLATA ACLREQNVPF VVLERADCIA SLWQNRTYDR LKLHLPKKFC QLPKMPFPES FPEYPTKRQF
101: IDYLESYASR FEINPKFNEC VQTARFDETS GLWRVKTVSN AESTRTEVEY ICRWFVVATG ENAERVVPEI DGLNEFTGEV IHACDYKSGE KFAGKKVLVV
201: GCGNSGMEVS LDLANHFAKP SMVVRSSVHV MPREVMGKST FELAMKMLAW LPLWLVDKIL LVLCWLVLGN IEKYGLKRPE MGPMELKSVK GKTPVLDIGA
301: LEKIRSGKID VVPGVKRFDG NRVELVNGEQ LEADSVVLAT GYRSNVPYWL QESEFFAKNG FPKAANSGWK GRTGLYAVGF TRRGLSGVSM DAVKIAQDIG
401: SVWKLETKQP TKRSTASHRR CISQQF

Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)

001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF

Arabidopsis Description

YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.