Factsheet for TraesCSU01G065000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	55.96	36.09
GSMUA_Achr11P...	Banana	cytosol	54.59	34.1
Os04t0128900-01	Rice	peroxisome	62.39	32.46
GSMUA_Achr1P03360_001	Banana	peroxisome	50.46	31.98
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	55.5	31.84
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	60.55	31.35
EES11777	Sorghum	cytosol, peroxisome, plastid	60.55	31.28
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	50.92	30.58
CDY72645	Canola	cytosol	47.25	30.12
GSMUA_Achr4P25050_001	Banana	cytosol	51.83	29.89
GSMUA_Achr2P04250_001	Banana	cytosol	50.0	28.76
GSMUA_Achr1P24210_001	Banana	cytosol	49.08	28.23
GSMUA_AchrUn_...	Banana	mitochondrion	50.92	28.17
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	47.25	27.32
CDY14230	Canola	cytosol	47.71	26.2
KRH67507	Soybean	cytosol, peroxisome, plastid	50.92	26.18
CDY18209	Canola	cytosol, peroxisome, plastid	50.46	26.07
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	47.71	26.07
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	50.92	26.06
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	50.0	25.95
CDX89837	Canola	cytosol, peroxisome, plastid	50.0	25.95
KRG95789	Soybean	cytosol, peroxisome, plastid	50.46	25.94
CDY14900	Canola	cytosol	45.87	25.77
VIT_07s0005g04800.t01	Wine grape	cytosol	50.0	25.71
CDY10073	Canola	cytosol, peroxisome, plastid	49.54	25.65
CDY32533	Canola	cytosol	49.54	25.59
Bra032524.1-P	Field mustard	cytosol	49.54	25.59
CDY22326	Canola	cytosol	50.0	25.59
CDX94734	Canola	cytosol, peroxisome, plastid	50.0	25.59
KRH32274	Soybean	cytosol	49.54	25.53
AT5G43890.1	Thale cress	cytosol	49.54	25.47
CDY69333	Canola	cytosol	48.62	25.42
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	49.08	25.3
AT1G04180.1	Thale cress	cytosol	48.62	25.18
Bra032499.1-P	Field mustard	cytosol	48.62	25.12
AT2G33230.1	Thale cress	plastid	49.08	24.83
Solyc09g064160.2.1	Tomato	cytosol	47.25	24.82
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	47.25	24.82
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	49.54	24.66
CDY53200	Canola	golgi, peroxisome, plastid	48.17	24.42
CDY06876	Canola	cytosol	47.71	24.41
CDX97452	Canola	cytosol	47.71	24.41
Bra011055.1-P	Field mustard	cytosol	47.71	24.41
CDY35214	Canola	cytosol	47.71	24.41
Solyc06g083700.2.1	Tomato	cytosol	46.33	24.28
Bra010354.1-P	Field mustard	cytosol	47.25	24.18
KRG90286	Soybean	cytosol, peroxisome, plastid	48.62	24.15
Solyc06g008050.2.1	Tomato	peroxisome	45.41	24.09
PGSC0003DMT400051713	Potato	cytosol	45.87	24.04
AT1G04610.1	Thale cress	cytosol	48.17	24.03
PGSC0003DMT400038139	Potato	peroxisome	44.95	24.02
AT4G28720.1	Thale cress	cytosol	46.79	23.94
CDX89807	Canola	plastid	47.71	23.85
Bra015334.1-P	Field mustard	plastid	47.71	23.85
KRH33524	Soybean	cytosol, peroxisome, plastid	48.17	23.81
CDY61147	Canola	plastid	47.25	23.62
CDY19472	Canola	cytosol, peroxisome, plastid	46.79	23.39
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	46.33	23.17
PGSC0003DMT400030255	Potato	cytosol	44.04	22.91
CDY17153	Canola	peroxisome	45.41	22.71
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	46.79	22.37
Solyc09g091090.1.1	Tomato	peroxisome	44.04	22.27
HORVU7Hr1G007860.1	Barley	cytosol	78.9	20.7
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	77.06	20.61
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	22.94	20.16
TraesCSU01G038800.1	Wheat	endoplasmic reticulum, extracellular, plastid	25.23	16.92
TraesCSU01G186300.1	Wheat	endoplasmic reticulum, plastid	25.23	16.92
Zm00001d005602_P001	Maize	endoplasmic reticulum	7.34	7.8

Protein Annotations

EnsemblPlants:TraesCSU01G065000.1	EnsemblPlantsGene:TraesCSU01G065000	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	PANTHER:PTHR43539
PANTHER:PTHR43539:SF2	SEG:seg	SUPFAM:SSF51905	TMHMM:TMhelix	MapMan:11.2.1.1.2	:

Description

No Description!

Coordinates

chrUn:+:50772803..50773459

Molecular Weight (calculated)

23665.0 Da

IEP (calculated)

9.571

GRAVY (calculated)

0.290

Length

218 amino acids

Sequence
(BLAST)

001: MSYIGKRVLV VGCGQSGMEV SVDLCNGGVI PFMVVRNVVG IATIYLTMLL MRWLPLSLVD KIMAFLAWLL LGDLARLGIR TPAVDSLTFK KTDDNGRAWC
101: AIARRIRSGD ITVVPSVARF TKSGAELSDG SVVDIDAVIL ATGYRSNVTR WFQGIELLGK DGCPKTSFTD GWNGHSGLYS VGFTRRDLLG ASADAVCVAK
201: DLAVSWRENT KPRKSVIF

Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)

001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A

Arabidopsis Description

YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.