Factsheet for PGSC0003DMT400051713

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 1
plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400015077
PGSC0003DMT400050482
PGSC0003DMT400071510
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	PGSC0003DMT400071510	AT4G19030.1	21798944
AT4G28720.1	PGSC0003DMT400073246	AT4G19030.1	21798944
AT4G28720.1	PGSC0003DMT400015077	AT5G22290.1	21798944
AT4G28720.1	PGSC0003DMT400050482	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g083700.2.1	Tomato	cytosol	97.84	97.84
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	85.58	85.78
PGSC0003DMT400038139	Potato	peroxisome	81.97	83.58
VIT_07s0005g04800.t01	Wine grape	cytosol	75.96	74.53
KRG95789	Soybean	cytosol, peroxisome, plastid	74.28	72.88
CDY14230	Canola	cytosol	69.47	72.8
KRH67507	Soybean	cytosol, peroxisome, plastid	74.04	72.64
CDY14900	Canola	cytosol	67.55	72.42
CDY35214	Canola	cytosol	73.8	72.07
CDY06876	Canola	cytosol	73.8	72.07
Bra011055.1-P	Field mustard	cytosol	73.8	72.07
CDY18209	Canola	cytosol, peroxisome, plastid	73.08	72.04
AT1G04180.1	Thale cress	cytosol	72.84	71.97
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	68.99	71.93
CDX89837	Canola	cytosol, peroxisome, plastid	72.6	71.9
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	72.6	71.9
AT5G43890.1	Thale cress	cytosol	72.84	71.46
CDX97452	Canola	cytosol	73.08	71.36
Bra010354.1-P	Field mustard	cytosol	73.08	71.36
CDY72645	Canola	cytosol	58.65	71.34
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	71.88	70.69
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	42.07	70.56
KRH32274	Soybean	cytosol	71.63	70.45
AT4G28720.1	Thale cress	cytosol	72.12	70.42
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	72.12	70.42
CDY32533	Canola	cytosol	71.39	70.38
CDY22326	Canola	cytosol	71.88	70.19
Bra032524.1-P	Field mustard	cytosol	71.15	70.14
CDY10073	Canola	cytosol, peroxisome, plastid	70.91	70.07
CDX94734	Canola	cytosol, peroxisome, plastid	71.63	69.95
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	56.73	69.82
GSMUA_Achr11P...	Banana	cytosol	58.41	69.63
CDY69333	Canola	cytosol	68.99	68.82
GSMUA_Achr1P03360_001	Banana	peroxisome	55.77	67.44
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	58.65	67.22
PGSC0003DMT400030255	Potato	cytosol	67.55	67.06
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	60.34	66.05
GSMUA_Achr1P24210_001	Banana	cytosol	59.86	65.7
GSMUA_Achr4P25050_001	Banana	cytosol	59.13	65.08
GSMUA_AchrUn_...	Banana	mitochondrion	61.54	64.97
TraesCS2A01G011500.1	Wheat	plastid	64.9	64.59
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	65.14	64.37
Os04t0128900-01	Rice	peroxisome	64.66	64.2
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	64.9	64.13
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	57.21	63.13
EES11777	Sorghum	cytosol, peroxisome, plastid	63.7	62.8
GSMUA_Achr2P04250_001	Banana	cytosol	56.73	62.27
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	62.26	61.52
Zm00001d005439_P001	Maize	plastid	55.53	58.04
Os07t0437000-01	Rice	mitochondrion	55.05	57.54
HORVU2Hr1G001820.1	Barley	plastid	65.14	57.54
TraesCS2B01G562800.1	Wheat	mitochondrion	57.45	57.45
TraesCS2A01G533200.1	Wheat	mitochondrion	57.45	57.45
TraesCS2D01G535100.1	Wheat	mitochondrion	56.97	56.97
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	47.36	56.94
PGSC0003DMT400067103	Potato	cytosol	45.43	56.59
TraesCS4A01G313200.1	Wheat	mitochondrion	55.53	56.34
HORVU5Hr1G125560.2	Barley	mitochondrion	56.01	56.28
PGSC0003DMT400037628	Potato	cytosol	55.77	55.64
KXG35000	Sorghum	plastid	55.29	54.12
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	56.97	51.97
Zm00001d005602_P001	Maize	endoplasmic reticulum	25.0	50.73
HORVU2Hr1G116980.1	Barley	plastid	57.69	50.21
EES15155	Sorghum	peroxisome	52.64	49.44
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	55.77	49.36
PGSC0003DMT400092778	Potato	extracellular, peroxisome, plasma membrane	36.78	45.95
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	24.04	45.87
PGSC0003DMT400094923	Potato	extracellular	40.62	44.36
PGSC0003DMT400097007	Potato	cytosol, peroxisome, plastid	40.14	43.26
PGSC0003DMT400090184	Potato	cytosol	23.8	43.04
PGSC0003DMT400088054	Potato	cytosol	31.73	42.17
PGSC0003DMT400085760	Potato	cytosol, nucleus, peroxisome	22.84	39.42
OQU88910	Sorghum	plastid	20.91	38.33
Zm00001d019527_P005	Maize	peroxisome	36.3	35.12
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	50.48	25.77
HORVU7Hr1G007860.1	Barley	cytosol	50.48	25.27

Protein Annotations

EntrezGene:102580524	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	UniProt:M1BS37	PFAM:PF00743
EnsemblPlantsGene:PGSC0003DMG400020079	PGSC:PGSC0003DMG400020079	EnsemblPlants:PGSC0003DMT400051713	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI0002949800
RefSeq:XP_006352723.1	:	:	:	:	:

Description

Flavin monooxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400020079]

Coordinates

chr6:-:58577357..58579120

Molecular Weight (calculated)

46659.5 Da

IEP (calculated)

9.073

GRAVY (calculated)

-0.181

Length

416 amino acids

Sequence
(BLAST)

001: MFTFSSEQDS VSRRCVWVNG PVIVGAGPSG LAVGACLREQ GVPFVVIERS DCIASLWQKR TYDRLKLHLP KKFCQLPKFP FPNHFPEYPT KRQFIEYLEL
101: YAKHFDINPQ FNECVQSAKY DETCRVWRVK TSSPNGFEVE YISQWLVVAT GENAERVVPD IEGLKEFGGE VIHACDYKSG EKYQGKKVVV VGCGNSGMEV
201: SLDLSNHGAQ PSIVCRSSVH VLPREIFGKS TFELAMFMMK WVPLWLVDKI LLILAWFILG NIENYGLKRP SIGPLELKNK HGKTPVLDIG ALEKIRSGKV
301: KVVPGIKKFS CGTVELVTGE KLEIDSVVLA TGYCSNVPYW LQESEFFSNN GFPKAQFPNN WKGKSGLYAI GFTRKGLAGA SADAINIAQD IGKVYKEDLK
401: QKKQKVPTHR RCISTF

Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)

001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF

Arabidopsis Description

YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.