Factsheet for PGSC0003DMT400037628

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g068160.1.1	Tomato	cytosol	91.85	93.19
KRH16221	Soybean	cytosol, nucleus, peroxisome	74.34	71.1
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	74.1	70.71
VIT_04s0008g03920.t01	Wine grape	cytosol	70.26	70.6
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	73.14	69.32
KRH04824	Soybean	cytosol, nucleus, peroxisome	72.42	68.95
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	68.82	66.44
AT5G25620.2	Thale cress	cytosol	68.82	66.13
Bra036547.1-P	Field mustard	cytosol	68.82	65.08
CDX87078	Canola	extracellular	33.81	64.98
CDY62422	Canola	cytosol, nucleus, peroxisome	68.82	64.93
CDX80530	Canola	cytosol, nucleus, peroxisome	68.82	64.93
GSMUA_Achr9P05490_001	Banana	cytosol	64.75	64.75
CDY05502	Canola	cytosol, nucleus, peroxisome	68.59	64.56
Bra020509.1-P	Field mustard	cytosol	67.63	64.53
CDY54895	Canola	cytosol, nucleus, peroxisome	68.35	64.33
CDY19798	Canola	cytosol, nucleus, peroxisome	68.59	63.98
Os05t0528600-01	Rice	extracellular	60.67	62.47
Os01t0732700-01	Rice	cytosol	65.71	61.99
GSMUA_Achr2P19930_001	Banana	cytosol	61.15	61.59
KXG33311	Sorghum	cytosol	64.27	61.47
TraesCS3D01G280900.1	Wheat	peroxisome	64.03	61.1
HORVU3Hr1G069580.2	Barley	cytosol	63.55	60.64
TraesCS3A01G280900.1	Wheat	peroxisome	63.55	60.64
TraesCS3B01G314700.1	Wheat	peroxisome	63.31	60.41
Zm00001d011764_P001	Maize	cytosol	65.23	59.91
PGSC0003DMT400067103	Potato	cytosol	47.96	59.88
PGSC0003DMT400038139	Potato	peroxisome	57.07	58.33
PGSC0003DMT400030255	Potato	cytosol	58.03	57.76
GSMUA_Achr5P06860_001	Banana	peroxisome	58.99	57.08
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	55.64	55.9
PGSC0003DMT400051713	Potato	cytosol	55.64	55.77
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	58.51	55.08
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	52.04	54.66
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	32.37	54.44
PGSC0003DMT400090184	Potato	cytosol	25.66	46.52
PGSC0003DMT400094923	Potato	extracellular	41.01	44.88
PGSC0003DMT400097007	Potato	cytosol, peroxisome, plastid	41.01	44.3
PGSC0003DMT400092778	Potato	extracellular, peroxisome, plasma membrane	34.29	42.94
PGSC0003DMT400088054	Potato	cytosol	32.13	42.81
PGSC0003DMT400085760	Potato	cytosol, nucleus, peroxisome	21.82	37.76

Protein Annotations

EntrezGene:102590029	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009819	GO:GO:0009851	GO:GO:0009987	GO:GO:0016491	GO:GO:0047134	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	UniProt:M1B5M2	PFAM:PF00743	EnsemblPlantsGene:PGSC0003DMG400014510
PGSC:PGSC0003DMG400014510	EnsemblPlants:PGSC0003DMT400037628	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI0002954A39	RefSeq:XP_006356642.1
SEG:seg	:	:	:	:	:

Description

Flavin monooxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400014510]

Coordinates

chr8:-:43037957..43041826

Molecular Weight (calculated)

46768.1 Da

IEP (calculated)

8.944

GRAVY (calculated)

-0.122

Length

417 amino acids

Sequence
(BLAST)

001: MDYLKEIQGK TCHDHPYFNK MNTNTNTKRC VFVNGPVIVG AGPSGLAAAA CLTAKGVQSL VVERCNCIAS LWQLKTYNRL SLHLPKQFCE LPLMSFPHDF
101: PTYPTKQQFI KYLELYAMTF NIRPLFNQTV ISANYDRNLG LWRIRTDTMT TTMTTSSTEY VTRWLIVATG ENAEAVLPHI EGMEEFGGTI MHTSLYKSGE
201: VFTRKKVLVV GCGNSGMEVC LDLCNHDATP SLVVRDTVHV LPREMLGKST FGLSMWLLKW LPIRLVDRFL LITSRLLLGD TSRLGLDRPE IGPLELKNLS
301: GKTPVLDVGT LAKIKSGDIK VCPGIKRLLK HHTVEFVNGQ TEEYDAIILA TGYKSNVPSW LKEKEMFSEK DGLPKRPFPN GWKGECGLYA VGFTKRGLLG
401: ASIDAKKIAE HIHQYFQ

Best Arabidopsis Sequence Match ( AT5G25620.1 )
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQVKKI

Arabidopsis Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.