Factsheet for GSMUA_Achr10P22060_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06860_001	Banana	peroxisome	64.99	59.86
GSMUA_Achr2P19930_001	Banana	cytosol	60.45	57.97
VIT_04s0008g03920.t01	Wine grape	cytosol	59.19	56.63
CDX87078	Canola	extracellular	30.73	56.22
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	49.62	55.34
GSMUA_Achr9P05490_001	Banana	cytosol	57.18	54.44
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	59.45	53.27
Solyc08g068160.1.1	Tomato	cytosol	54.66	52.8
GSMUA_Achr1P03360_001	Banana	peroxisome	45.59	52.62
GSMUA_Achr4P03480_001	Banana	extracellular	48.61	52.59
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	57.43	52.17
PGSC0003DMT400037628	Potato	cytosol	54.66	52.04
KRH16221	Soybean	cytosol, nucleus, peroxisome	56.42	51.38
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	56.93	51.36
GSMUA_Achr11P...	Banana	cytosol	45.09	51.29
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	43.58	51.18
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	48.87	51.05
GSMUA_Achr1P05290_001	Banana	peroxisome	45.34	50.56
KRH04824	Soybean	cytosol, nucleus, peroxisome	55.67	50.46
GSMUA_Achr2P04250_001	Banana	cytosol	47.86	50.13
GSMUA_Achr4P25050_001	Banana	cytosol	47.61	50.0
GSMUA_AchrUn_...	Banana	peroxisome	42.82	49.56
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	45.09	49.31
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	46.35	48.81
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	52.9	48.61
GSMUA_Achr1P24210_001	Banana	cytosol	46.35	48.55
AT5G25620.2	Thale cress	cytosol	52.64	48.16
CDX80530	Canola	cytosol, nucleus, peroxisome	53.4	47.96
CDY62422	Canola	cytosol, nucleus, peroxisome	52.9	47.51
Bra020509.1-P	Field mustard	cytosol	52.14	47.37
CDY05502	Canola	cytosol, nucleus, peroxisome	52.64	47.18
GSMUA_AchrUn_...	Banana	mitochondrion	46.6	46.95
CDY54895	Canola	cytosol, nucleus, peroxisome	51.89	46.5
Bra036547.1-P	Field mustard	cytosol	51.64	46.49
CDY19798	Canola	cytosol, nucleus, peroxisome	51.89	46.09
GSMUA_Achr4P03000_001	Banana	mitochondrion	42.07	44.41
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	41.81	41.4
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	35.01	40.76
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	36.52	40.17
GSMUA_Achr6P17640_001	Banana	plastid	30.73	37.65
GSMUA_Achr8P00130_001	Banana	plasma membrane	33.25	37.18
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	29.97	35.42
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	25.69	31.78

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G22060_001	EnsemblPlants:GSMUA_Achr10P22060_001
EnsemblPlants:GSMUA_Achr10T22060_001	InterPro:IPR036188	UniProt:M0RKD1	PFAM:PF00743	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI0002948716	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G22060_001]

Coordinates

chr10:+:27385120..27386980

Molecular Weight (calculated)

44360.4 Da

IEP (calculated)

9.677

GRAVY (calculated)

-0.268

Length

397 amino acids

Sequence
(BLAST)

001: MQECPRSVLL SSPTRQLQPP FHVDEACDDR RQGRAARAFP GAYRRRGWAV GVGGRRLPQG QRHSQLDLRT IQLHRIAVAT PDQFVAYLEA YVRQFDIQPV
101: FNASVVAAEY DAAAGFWRVR TVSSGGGSEK ERTEYVCRWV VVATGENAEA VVPEIAGLEE FKGPVVHTSL YRRGDVYRNK RVLVVGCGNS GMEVSLDLCN
201: HNAHPSMVVR DSVHILPREM LGRSTFGLSM WLLKWLSVKT VDRFLLFVAR LVLGDTSKFG LRRPQLGPLE LKSHSGKTPV LDVGTLAKIK SGDIKVRPAV
301: RRIMEHGAEF ADGTVEEFDV VILATGYQSN VPRWLQEREF FSEKDGLPRR PFPNGWKGRN GLYAVGFTKR GLLGASLDAL RIAQDIELCC KTDENCR

Best Arabidopsis Sequence Match ( AT4G13260.3 )
(BLAST)

001: MIVFDFISLK ISPVFNQTVE EAKFDRRCGL WRVRTTGGKK DETMEYVSRW LVVATGENAE EVMPEIDGIP DFGGPILHTS SYKSGEIFSE KKILVVGCGN
101: SGMEVCLDLC NFNALPSLVV RDSVHVLPQE MLGISTFGIS TSLLKWFPVH VVDRFLLRMS RLVLGDTDRL GLVRPKLGPL ERKIKCGKTP VLDVGTLAKI
201: RSGHIKVYPE LKRVMHYSAE FVDGRVDNFD AIILATGYKS NVPMWLKGVN MFSEKDGFPH KPFPNGWKGE SGLYAVGFTK LGLLGAAIDA KKIAEDIEVQ
301: RHFLPLARPQ HC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.