Factsheet for GSMUA_Achr1P05290_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	peroxisome	76.12	79.01
TraesCS3B01G261900.1	Wheat	cytosol	66.01	58.02
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	66.01	57.88
HORVU3Hr1G057950.1	Barley	cytosol	66.01	57.88
TraesCS3D01G220500.1	Wheat	cytosol	66.29	57.7
TraesCS3A01G232600.1	Wheat	cytosol	66.01	57.46
VIT_04s0008g04870.t01	Wine grape	cytosol	59.55	57.14
OQU87233	Sorghum	cytosol	66.85	56.4
PGSC0003DMT400067103	Potato	cytosol	52.81	56.29
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	64.89	55.26
AT5G11320.1	Thale cress	cytosol	63.76	55.23
KRH61831	Soybean	cytosol	62.64	55.06
Bra008971.1-P	Field mustard	cytosol	63.48	54.99
CDX97092	Canola	cytosol	63.2	54.74
KRH52507	Soybean	cytosol	61.52	54.48
Solyc06g065630.2.1	Tomato	cytosol	62.36	54.15
CDY71529	Canola	cytosol, peroxisome	45.79	53.97
CDY50808	Canola	peroxisome	51.97	53.78
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	53.65	53.65
CDY71836	Canola	plastid	54.49	53.44
Bra023318.1-P	Field mustard	plastid	61.24	53.04
GSMUA_Achr11P...	Banana	cytosol	51.97	53.01
KRH16035	Soybean	cytosol	58.15	52.94
GSMUA_Achr1P03360_001	Banana	peroxisome	51.12	52.91
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	50.0	52.66
CDX85720	Canola	peroxisome	60.67	52.55
KRH05083	Soybean	cytosol	59.83	52.46
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	53.37	52.34
Bra040081.1-P	Field mustard	plastid	59.55	51.71
CDY39891	Canola	plastid	59.27	51.46
CDY23330	Canola	plastid	59.27	51.46
GSMUA_Achr4P25050_001	Banana	cytosol	54.21	51.06
AT4G32540.2	Thale cress	cytosol	58.99	50.48
Bra011354.1-P	Field mustard	cytosol	59.27	50.48
GSMUA_Achr4P03480_001	Banana	extracellular	51.97	50.41
GSMUA_Achr2P04250_001	Banana	cytosol	53.65	50.4
CDX68858	Canola	plastid	58.99	50.0
CDX75253	Canola	cytosol	58.71	50.0
GSMUA_Achr2P19930_001	Banana	cytosol	57.87	49.76
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	53.09	49.74
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	51.97	49.07
GSMUA_Achr9P05490_001	Banana	cytosol	56.74	48.44
GSMUA_Achr4P03000_001	Banana	mitochondrion	50.56	47.87
GSMUA_Achr1P24210_001	Banana	cytosol	50.28	47.23
GSMUA_AchrUn_...	Banana	mitochondrion	52.25	47.21
GSMUA_Achr5P06860_001	Banana	peroxisome	56.74	46.87
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	56.74	45.6
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	51.12	45.39
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	50.56	45.34
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	43.26	45.16
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	41.57	41.0
GSMUA_Achr8P00130_001	Banana	plasma membrane	40.17	40.28
GSMUA_Achr6P17640_001	Banana	plastid	33.43	36.73
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	33.71	35.71
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	30.62	33.96

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G05290_001
EnsemblPlants:GSMUA_Achr1P05290_001	EnsemblPlants:GSMUA_Achr1T05290_001	InterPro:IPR036188	UniProt:M0RX87	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00368	PFscan:PS51257	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	SUPFAM:SSF51905	UniParc:UPI000294F745
SEG:seg	:	:	:	:	:

Description

YUC4, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G05290_001]

Coordinates

chr1:-:4368766..4370361

Molecular Weight (calculated)

38560.2 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.045

Length

356 amino acids

Sequence
(BLAST)

001: MGSAREAEGE ISPATWTPGP IIVGAGPSGL AAAACLADGF PKYPSKQQFV SYMESYAAAF GVRPRFRTEV LAAEFDGAIG AWRVRTRDGG ELVSRWLVVA
101: TGENAEPVIP EFPGMDRFGG RVVHTCAYKC GADFKGEKVL VVGCGNSGME VSLDLCRHGA RPYMVVRNTV RVLPREMLGL STFGVSMALL RWLPLRLVDQ
201: FLCAMAHLLL GDTDRLGLRR PKTGPIELKN LTGKTPVLDV GALAQIKSGN IKVMQGLKEM TTGGAKFVDG TEMQFDSIIM ATGYKSNVPS WLKGDCGLFT
301: KEGMAKDPFP GGWKGEKGLY CVGFTRRGLL GASHDALNIA RDVLLRWKEP RHMAMR

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.