Factsheet for TraesCS3D01G220500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G232600.1	Wheat	cytosol	98.04	98.04
HORVU3Hr1G057950.1	Barley	cytosol	96.09	96.8
TraesCS3B01G261900.1	Wheat	cytosol	95.11	96.05
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	83.13	83.74
OQU87233	Sorghum	cytosol	80.2	77.73
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	78.97	77.27
GSMUA_Achr1P05290_001	Banana	peroxisome	57.7	66.29
GSMUA_AchrUn_...	Banana	peroxisome	54.77	65.31
PGSC0003DMT400067103	Potato	cytosol	48.66	59.58
AT5G11320.1	Thale cress	cytosol	59.41	59.12
KRH61831	Soybean	cytosol	58.44	59.01
VIT_04s0008g04870.t01	Wine grape	cytosol	53.3	58.76
CDY50808	Canola	peroxisome	49.39	58.72
KRH16035	Soybean	cytosol	55.99	58.57
KRH52507	Soybean	cytosol	57.46	58.46
Bra023318.1-P	Field mustard	plastid	58.44	58.15
CDX85720	Canola	peroxisome	58.19	57.91
CDX97092	Canola	cytosol	57.95	57.66
CDY71836	Canola	plastid	51.1	57.58
Solyc06g065630.2.1	Tomato	cytosol	57.7	57.56
Bra008971.1-P	Field mustard	cytosol	57.7	57.42
KRH05083	Soybean	cytosol	56.97	57.39
Bra040081.1-P	Field mustard	plastid	56.23	56.1
CDY39891	Canola	plastid	55.99	55.85
AT4G32540.2	Thale cress	cytosol	56.72	55.77
CDY23330	Canola	plastid	55.75	55.61
Bra011354.1-P	Field mustard	cytosol	55.5	54.31
CDX75253	Canola	cytosol	55.26	54.07
CDX68858	Canola	plastid	55.26	53.81
TraesCS4D01G276600.1	Wheat	cytosol	53.3	52.03
TraesCS5D01G114500.1	Wheat	cytosol	54.28	51.51
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	51.59	50.12
TraesCS3D01G280900.1	Wheat	peroxisome	53.55	50.11
CDY71529	Canola	cytosol, peroxisome	36.67	49.67
TraesCS2D01G535100.1	Wheat	mitochondrion	48.9	48.08
TraesCS3D01G157600.1	Wheat	cytosol	50.12	46.49
TraesCS5D01G225200.1	Wheat	cytosol	43.03	44.22
TraesCS7D01G071900.1	Wheat	cytosol	22.74	44.08
TraesCS7D01G070900.1	Wheat	extracellular, plasma membrane	40.83	43.6
TraesCS2D01G566200.1	Wheat	plasma membrane, plastid	30.56	43.4
TraesCS7D01G071500.1	Wheat	extracellular, plastid	40.1	42.93
TraesCS7D01G060000.1	Wheat	plastid	40.59	42.67
TraesCS7D01G071400.1	Wheat	extracellular	39.61	42.41
TraesCS7D01G072000.1	Wheat	endoplasmic reticulum, extracellular	39.61	42.41
TraesCS2D01G566100.1	Wheat	plasma membrane	39.61	42.41
TraesCS7D01G071800.1	Wheat	extracellular, plastid	39.12	41.88
TraesCS2D01G565800.1	Wheat	endoplasmic reticulum	26.65	41.44
TraesCS5D01G556600.1	Wheat	plasma membrane	38.39	41.1
TraesCS2D01G565900.1	Wheat	cytosol, nucleus, peroxisome	31.05	39.81
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	43.77	21.96
TraesCS2D01G566000.1	Wheat	plastid	38.39	21.48

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PFscan:PS51257	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1
InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G220500	EnsemblPlants:TraesCS3D01G220500.1	SEG:seg

Description

No Description!

Coordinates

chr3D:+:301221826..301224275

Molecular Weight (calculated)

44328.4 Da

IEP (calculated)

8.155

GRAVY (calculated)

-0.109

Length

409 amino acids

Sequence
(BLAST)

001: MDKEEQEGRA TWVPGAVIVG AGPSGLAAAA CLAARGVPAT VLERSDSLAF TWRHRMYDRL ALHLPKRFCE LPLLPFPAEY PTYPCKDQFV AYMEAYAAAA
101: GVAPRFGASV EEAAFDASAA AWAVRLAGGE VLMTRWLVVA TGENAEPHVP DFPGMQQFAG RVLHTCEYKC GEEFAGEKVL VVGCGNSGME VSLDLCRHGA
201: KPSMVVRNTV HVLPKEMLGV STFGIAMALL KWLPVQLVDR FILAAARLTL GNTSRLGLRR PKTGPIELKN LTGRTPVLDV GTLDHIKSGK IKVVGAVKEV
301: TRVGARLADG KEEQQFDAII LATGYRSNVP SWLKDGGDVF TREGTPKTPF PDGWKGRNGL YTVGFSQRGL LGASSDALCV ARDIHCQWRE RERERDKPTS
401: DVHQADSSV

Best Arabidopsis Sequence Match ( AT4G32540.1 )
(BLAST)

001: MESHPHNKTD QTQHIILVHG PIIIGAGPSG LATSACLSSR GVPSLILERS DSIASLWKSK TYDRLRLHLP KHFCRLPLLD FPEYYPKYPS KNEFLAYLES
101: YASHFRIAPR FNKNVQNAAY DSSSGFWRVK THDNTEYLSK WLIVATGENA DPYFPEIPGR KKFSGGKIVH ASEYKSGEEF RRQKVLVVGC GNSGMEISLD
201: LVRHNASPHL VVRNTVHVLP REILGVSTFG VGMTLLKCLP LRLVDKFLLL MANLSFGNTD RLGLRRPKTG PLELKNVTGK SPVLDVGAMS LIRSGMIQIM
301: EGVKEITKKG AKFMDGQEKD FDSIIFATGY KSNVPTWLQG GDFFTDDGMP KTPFPNGWRG GKGLYTVGFT RRGLLGTASD AVKIAGEIGD QWRDEIKGST
401: RNMCSSRFVF TSKS

Arabidopsis Description

YUCFlavin-binding monooxygenase family protein [Source:TAIR;Acc:AT4G32540]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.