CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16035	Soybean	cytosol	91.38	94.88
KRH61831	Soybean	cytosol	74.63	74.81
KRH52507	Soybean	cytosol	73.65	74.38
VIT_04s0008g04870.t01	Wine grape	cytosol	63.3	69.27
AT5G11320.1	Thale cress	cytosol	68.47	67.64
CDX97092	Canola	cytosol	67.98	67.15
PGSC0003DMT400067103	Potato	cytosol	54.93	66.77
Bra008971.1-P	Field mustard	cytosol	67.0	66.18
CDX85720	Canola	peroxisome	66.75	65.94
Bra023318.1-P	Field mustard	plastid	66.75	65.94
CDY50808	Canola	peroxisome	55.42	65.41
Solyc06g065630.2.1	Tomato	cytosol	66.01	65.37
CDY71836	Canola	plastid	55.17	61.71
Bra040081.1-P	Field mustard	plastid	61.82	61.22
CDX75253	Canola	cytosol	62.81	61.0
CDY39891	Canola	plastid	61.58	60.98
CDY23330	Canola	plastid	61.33	60.73
AT4G32540.2	Thale cress	cytosol	62.07	60.58
Bra011354.1-P	Field mustard	cytosol	62.32	60.53
CDX68858	Canola	plastid	62.56	60.48
GSMUA_AchrUn_...	Banana	peroxisome	50.99	60.35
GSMUA_Achr1P05290_001	Banana	peroxisome	52.46	59.83
CDY71529	Canola	cytosol, peroxisome	43.84	58.94
TraesCS3B01G261900.1	Wheat	cytosol	57.39	57.53
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	57.39	57.39
TraesCS3D01G220500.1	Wheat	cytosol	57.39	56.97
HORVU3Hr1G057950.1	Barley	cytosol	56.9	56.9
TraesCS3A01G232600.1	Wheat	cytosol	56.9	56.48
KRH60285	Soybean	cytosol	55.66	54.59
KRH16221	Soybean	cytosol, nucleus, peroxisome	58.13	54.13
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	55.66	54.07
OQU87233	Sorghum	cytosol	56.16	54.03
KRG95789	Soybean	cytosol, peroxisome, plastid	56.4	54.01
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	58.13	54.0
KRH67507	Soybean	cytosol, peroxisome, plastid	56.16	53.77
KRH41577	Soybean	cytosol, nucleus, peroxisome	55.17	53.59
KRH48393	Soybean	peroxisome	56.16	53.4
KRH33524	Soybean	cytosol, peroxisome, plastid	57.88	53.29
KRH39284	Soybean	peroxisome	56.4	53.13
KRH04824	Soybean	cytosol, nucleus, peroxisome	57.14	52.97
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	57.14	52.73
KRG90286	Soybean	cytosol, peroxisome, plastid	56.65	52.39
KRH32274	Soybean	cytosol	53.94	51.77
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	53.94	51.77
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	40.89	43.57
KRH64052	Soybean	vacuole	40.89	43.57
KRH53357	Soybean	extracellular	42.86	43.5
KRG96368	Soybean	cytosol	40.39	42.05
KRH68103	Soybean	cytosol	39.16	41.41
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	42.12	39.4

Protein Annotations

EntrezGene:100798781	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02010668	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
EnsemblPlantsGene:GLYMA_17G205800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
UniProt:I1MWN3	InterPro:IPR036188	EnsemblPlants:KRH05083	ProteinID:KRH05083	ProteinID:KRH05083.1	PFAM:PF13738
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PFscan:PS51257	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1
InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000233F4CB	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:33528567..33531315

Molecular Weight (calculated)

45471.0 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.250

Length

406 amino acids

Sequence
(BLAST)

001: MGSCNKPQQQ QQQHVQGPII IGAGPSGLAV AACLSEHKVP FVILERHNCI ASLWQNKTYD RLKLHLPKQF CELPLKGFPH TFPKYPTKYQ FISYMESYAS
101: HFNIHPIFNQ TVESADFDKG SKVWVVKTQE VDYSSRWLVV ATGENAEPVV PRIHGMELFN GDVAHTSVYK SGSEYRNKKV LVIGCGNSGM EVCLDLCRHN
201: AKPYMVARNT VHVLPREMFG FSTFGVAMAL YKWFPIKLVD KIILLATNFI LGNTNHYGIK RPKTGPIELK LATGKTPVLD VGQVAQIKCG NIKVMEGVKE
301: ITRNGAKFMD GQEKEFDAII LATGYKSNVP TWLKGCDFFT EDGMPKTPFP HGWKGEQGLY TVGFTRRGLQ GTSCDAIKIA EDIAEQWRTV EDKSHCDSHI
401: ILLNNS

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.