CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48393	Soybean	peroxisome	95.82	96.72
KRH60285	Soybean	cytosol	79.35	82.61
KRH41577	Soybean	cytosol, nucleus, peroxisome	79.58	82.06
VIT_11s0016g03930.t01	Wine grape	cytosol, nucleus, peroxisome	70.53	72.04
KRH16221	Soybean	cytosol, nucleus, peroxisome	70.77	69.95
KRH04824	Soybean	cytosol, nucleus, peroxisome	70.07	68.95
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	68.91	67.96
AT4G13260.1	Thale cress	cytosol	64.04	66.51
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	66.82	65.45
KRH61831	Soybean	cytosol	53.6	57.04
KRH16035	Soybean	cytosol	51.74	57.03
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.45	56.5
KRH05083	Soybean	cytosol	53.13	56.4
KRH32274	Soybean	cytosol	55.22	56.26
KRH52507	Soybean	cytosol	52.2	55.97
KRG95789	Soybean	cytosol, peroxisome, plastid	53.83	54.72
KRH67507	Soybean	cytosol, peroxisome, plastid	53.83	54.72
KRG90286	Soybean	cytosol, peroxisome, plastid	55.45	54.44
KRH33524	Soybean	cytosol, peroxisome, plastid	55.45	54.2
KRH53357	Soybean	extracellular	42.69	46.0
KRH68103	Soybean	cytosol	39.68	44.53
KRG96368	Soybean	cytosol	39.68	43.85
KRH64052	Soybean	vacuole	37.82	42.78
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	36.89	41.73
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	42.0	41.71

Protein Annotations

EntrezGene:100776106	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02005929	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_09G190700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1L4I2	InterPro:IPR036188	EnsemblPlants:KRH39284	ProteinID:KRH39284
ProteinID:KRH39284.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000233915A	:	:

Description

hypothetical protein

Coordinates

chr9:+:41541489..41545319

Molecular Weight (calculated)

48292.3 Da

IEP (calculated)

9.319

GRAVY (calculated)

-0.119

Length

431 amino acids

Sequence
(BLAST)

001: MDYLKELEGK SVHDCYHHHQ QQQIKMSKMA SPIFVPGPVI VGAGPSGLAA AACLKQKGII PSLILERAQC LASMWQFKTY DRLRLHLPKQ FCQLPLMPFP
101: KNLPSYPTKQ QFLAYLKAYA DHFDIKPVFS QTVVSAEFDH VCQLWRVKTR GVIKKEDTAE YVCQWLIVAT GECAEEVVPQ IEGMGEFEGQ IVHTSKYKSG
201: SMFCGKNVLV VGCGNSGMEV CLDLCNHNAR PSLVVRDTVH ILPQQMLGKS TFGLSMFLLK WFPIRFVDQF LLLMSHLMLG DTAQFGLRRP KLGPLELKNL
301: YGKTPVLDVG TLTQIKNGKI KVCRGIKRLA RNAVEFVDGK VENFDAMVLA TGYKSNVPSW LKGSDMFSEK DGFPRKPFPN GWKGENGLYA VGFTKRGLLG
401: ASIDAKRIAE DIEHSWKAEA KHVLEFPRPL A

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.