CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41577	Soybean	cytosol, nucleus, peroxisome	93.48	92.58
KRH48393	Soybean	peroxisome	82.13	79.63
KRH39284	Soybean	peroxisome	82.61	79.35
VIT_11s0016g03930.t01	Wine grape	cytosol, nucleus, peroxisome	71.74	70.38
KRH16221	Soybean	cytosol, nucleus, peroxisome	68.84	65.37
KRH04824	Soybean	cytosol, nucleus, peroxisome	68.6	64.84
AT4G13260.1	Thale cress	cytosol	64.73	64.58
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	68.12	64.53
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	67.15	63.18
KRH16035	Soybean	cytosol	52.9	56.01
KRH61831	Soybean	cytosol	54.59	55.8
KRH05083	Soybean	cytosol	54.59	55.66
KRH52507	Soybean	cytosol	53.62	55.22
KRG95789	Soybean	cytosol, peroxisome, plastid	55.8	54.48
KRH67507	Soybean	cytosol, peroxisome, plastid	55.8	54.48
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.56	54.37
KRH32274	Soybean	cytosol	55.31	54.14
KRG90286	Soybean	cytosol, peroxisome, plastid	56.52	53.3
KRH33524	Soybean	cytosol, peroxisome, plastid	56.76	53.29
KRH53357	Soybean	extracellular	46.14	47.75
KRH68103	Soybean	cytosol	41.3	44.53
KRG96368	Soybean	cytosol	40.82	43.33
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	45.41	43.32
KRH64052	Soybean	vacuole	38.41	41.73
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	37.68	40.94

Protein Annotations

EntrezGene:100783701	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02003357	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_05G231100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1K5U9	InterPro:IPR036188	EnsemblPlants:KRH60285	ProteinID:KRH60285
ProteinID:KRH60285.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000295F29D	:	:

Description

hypothetical protein

Coordinates

chr5:-:40885414..40888810

Molecular Weight (calculated)

46082.5 Da

IEP (calculated)

8.520

GRAVY (calculated)

-0.093

Length

414 amino acids

Sequence
(BLAST)

001: MLYMEYLKEV EGKTVHDYLE VKMGKMTKPI GVEGPVIVGA GPSGLAAAAC LKQKGIPSLI LERDDCLASM WQLKTYDRLC LHLPKQFCQL PLMPFPQNFP
101: SYPTKQQFLA YLKAYADHFD IKPALSKTVI SANFDHRCGY WRVKTQGVKK EETEYVCQWL IVATGENAEE VVPQIEGMSE FEGPILHTSS YKSGSMFCGK
201: NVLVVGCGNS GMEVCLDLCN HHARPSLVVR DTVHILPQQM FGKSTFGLSL SLLNWFPMRL VDKFLLLMSH LILGDTAQFG LNRPKIGPLE LKNLCGKTPV
301: LDFGTLAHIK SGKIKVCRGI KQLAQHKAEF VDGKIEDFDV IILATGYKSN VPTWLKGSDM FCEKDGLPRK PFPNGWRGEN GLYAVGFTKR GLLGASFDAK
401: RIAGDIEHCW KAAN

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.