Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g03930.t01 | Wine grape | cytosol, nucleus, peroxisome | 66.75 | 65.64 |
| KRH60285 | Soybean | cytosol | 64.58 | 64.73 |
| KRH48393 | Soybean | peroxisome | 66.51 | 64.64 |
| KRH39284 | Soybean | peroxisome | 66.51 | 64.04 |
| KRH41577 | Soybean | cytosol, nucleus, peroxisome | 64.34 | 63.88 |
| AT5G25620.2 | Thale cress | cytosol | 62.17 | 59.45 |
| AT5G11320.1 | Thale cress | cytosol | 57.11 | 57.66 |
| AT1G04180.1 | Thale cress | cytosol | 55.18 | 54.39 |
| AT4G32540.2 | Thale cress | cytosol | 53.73 | 53.61 |
| AT2G33230.1 | Thale cress | plastid | 54.7 | 52.67 |
| AT5G43890.1 | Thale cress | cytosol | 53.49 | 52.36 |
| AT1G04610.1 | Thale cress | cytosol | 54.22 | 51.49 |
| AT4G28720.1 | Thale cress | cytosol | 52.77 | 51.41 |
| AT1G21430.1 | Thale cress | endoplasmic reticulum, extracellular | 42.17 | 44.76 |
| AT1G48910.1 | Thale cress | cytosol | 40.96 | 44.39 |
Protein Annotations
| MapMan:11.2.1.1.2 | Gene3D:3.50.50.60 | EntrezGene:826956 | ProteinID:AAL23751.1 | ProteinID:AEE83256.1 | ArrayExpress:AT4G13260 |
| EnsemblPlantsGene:AT4G13260 | RefSeq:AT4G13260 | TAIR:AT4G13260 | RefSeq:AT4G13260-TAIR-G | EnsemblPlants:AT4G13260.1 | TAIR:AT4G13260.1 |
| EMBL:AY133691 | ProteinID:CAB41936.1 | ProteinID:CAB78368.1 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009851 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | GO:GO:0103075 | InterPro:IPR036188 | RefSeq:NP_193062.1 |
| PFAM:PF00743 | PIRSF:PIRSF000332 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00368 | PRINTS:PR00469 |
| PANTHER:PTHR43539 | PANTHER:PTHR43539:SF13 | InterPro:Pyridine_nuc-diS_OxRdtase_2 | UniProt:Q9SVQ1 | SUPFAM:SSF51905 | UniParc:UPI0000048947 |
| Symbol:YUC2 | SEG:seg | : | : | : | : |
Description
YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
Coordinates
chr4:-:7721487..7724070
Molecular Weight (calculated)
46545.7 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.118
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.