Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97092 | Canola | cytosol | 88.32 | 88.32 |
| Bra008971.1-P | Field mustard | cytosol | 87.59 | 87.59 |
| Bra023318.1-P | Field mustard | plastid | 87.1 | 87.1 |
| CDX85720 | Canola | peroxisome | 86.86 | 86.86 |
| CDY50808 | Canola | peroxisome | 71.05 | 84.88 |
| CDY71529 | Canola | cytosol, peroxisome | 56.45 | 76.82 |
| PGSC0003DMT400067103 | Potato | cytosol | 57.18 | 70.36 |
| KRH52507 | Soybean | cytosol | 68.13 | 69.65 |
| KRH61831 | Soybean | cytosol | 68.37 | 69.38 |
| KRH16035 | Soybean | cytosol | 65.94 | 69.31 |
| VIT_04s0008g04870.t01 | Wine grape | cytosol | 62.53 | 69.27 |
| KRH05083 | Soybean | cytosol | 67.64 | 68.47 |
| Solyc06g065630.2.1 | Tomato | cytosol | 67.64 | 67.8 |
| AT4G32540.2 | Thale cress | cytosol | 66.18 | 65.38 |
| GSMUA_AchrUn_... | Banana | peroxisome | 53.53 | 64.14 |
| GSMUA_Achr1P05290_001 | Banana | peroxisome | 55.23 | 63.76 |
| Os01t0645400-02 | Rice | cytosol, peroxisome, plastid | 60.1 | 60.84 |
| TraesCS3B01G261900.1 | Wheat | cytosol | 59.61 | 60.49 |
| HORVU3Hr1G057950.1 | Barley | cytosol | 59.12 | 59.85 |
| TraesCS3D01G220500.1 | Wheat | cytosol | 59.12 | 59.41 |
| TraesCS3A01G232600.1 | Wheat | cytosol | 58.88 | 59.17 |
| AT4G13260.1 | Thale cress | cytosol | 57.66 | 57.11 |
| OQU87233 | Sorghum | cytosol | 58.15 | 56.64 |
| Zm00001d044069_P001 | Maize | cytosol, peroxisome, vacuole | 57.42 | 56.46 |
| AT4G28720.1 | Thale cress | cytosol | 57.18 | 55.16 |
| AT1G04180.1 | Thale cress | cytosol | 54.74 | 53.44 |
| AT5G25620.2 | Thale cress | cytosol | 56.2 | 53.23 |
| AT5G43890.1 | Thale cress | cytosol | 54.26 | 52.59 |
| AT1G04610.1 | Thale cress | cytosol | 55.47 | 52.17 |
| AT2G33230.1 | Thale cress | plastid | 54.01 | 51.51 |
| AT1G21430.1 | Thale cress | endoplasmic reticulum, extracellular | 44.28 | 46.55 |
| AT1G48910.1 | Thale cress | cytosol | 41.12 | 44.13 |
Protein Annotations
| MapMan:11.2.1.1.2 | Gene3D:3.50.50.60 | EntrezGene:831003 | UniProt:A0A178UJ31 | ProteinID:AED91659.1 | ProteinID:AED91660.1 |
| ArrayExpress:AT5G11320 | EnsemblPlantsGene:AT5G11320 | RefSeq:AT5G11320 | TAIR:AT5G11320 | RefSeq:AT5G11320-TAIR-G | EnsemblPlants:AT5G11320.1 |
| TAIR:AT5G11320.1 | ProteinID:CAB96667.1 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | GO:GO:0000003 | GO:GO:0000139 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009851 | GO:GO:0009908 |
| GO:GO:0009911 | GO:GO:0009987 | GO:GO:0010229 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0047434 |
| GO:GO:0048825 | GO:GO:0048827 | GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | GO:GO:0103075 |
| InterPro:IPR036188 | RefSeq:NP_196693.1 | RefSeq:NP_850808.1 | ProteinID:OAO93595.1 | PFAM:PF13738 | PIRSF:PIRSF000332 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000055 | PO:PO:0000229 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009001 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020144 | PO:PO:0025022 | PRINTS:PR00368 |
| PRINTS:PR00469 | PFscan:PS51257 | PANTHER:PTHR43539 | PANTHER:PTHR43539:SF1 | InterPro:Pyridine_nuc-diS_OxRdtase_2 | UniProt:Q9LFM5 |
| SUPFAM:SSF51905 | UniParc:UPI0000048B0A | Symbol:YUC4 | SEG:seg | : | : |
Description
YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
Coordinates
chr5:-:3611247..3613640
Molecular Weight (calculated)
45408.2 Da
IEP (calculated)
9.890
GRAVY (calculated)
-0.079
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.