CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85720	Canola	peroxisome	90.75	90.75
CDY50808	Canola	peroxisome	74.7	89.24
AT5G11320.1	Thale cress	cytosol	88.32	88.32
CDY71529	Canola	cytosol, peroxisome	62.53	85.1
PGSC0003DMT400067103	Potato	cytosol	55.72	68.56
KRH61831	Soybean	cytosol	67.4	68.4
KRH16035	Soybean	cytosol	64.72	68.03
KRH05083	Soybean	cytosol	67.15	67.98
KRH52507	Soybean	cytosol	66.42	67.91
VIT_04s0008g04870.t01	Wine grape	cytosol	60.83	67.39
Solyc06g065630.2.1	Tomato	cytosol	67.15	67.32
CDY71836	Canola	plastid	58.64	66.39
CDY39891	Canola	plastid	65.94	66.1
CDY23330	Canola	plastid	65.21	65.37
CDX75253	Canola	cytosol	65.21	64.11
CDX68858	Canola	plastid	64.96	63.57
GSMUA_AchrUn_...	Banana	peroxisome	52.8	63.27
GSMUA_Achr1P05290_001	Banana	peroxisome	54.74	63.2
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	58.64	59.36
TraesCS3B01G261900.1	Wheat	cytosol	57.91	58.77
HORVU3Hr1G057950.1	Barley	cytosol	57.66	58.37
TraesCS3D01G220500.1	Wheat	cytosol	57.66	57.95
TraesCS3A01G232600.1	Wheat	cytosol	57.18	57.46
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	57.42	56.46
OQU87233	Sorghum	cytosol	57.91	56.4
CDY06876	Canola	cytosol	57.66	55.63
CDY35214	Canola	cytosol	57.66	55.63
CDY14230	Canola	cytosol	53.53	55.42
CDY14900	Canola	cytosol	52.07	55.15
CDX97452	Canola	cytosol	56.45	54.46
CDY72645	Canola	cytosol	45.26	54.39
CDX89837	Canola	cytosol, peroxisome, plastid	54.74	53.57
CDY18209	Canola	cytosol, peroxisome, plastid	54.99	53.55
CDX94734	Canola	cytosol, peroxisome, plastid	55.47	53.52
CDY10073	Canola	cytosol, peroxisome, plastid	54.74	53.44
CDY32533	Canola	cytosol	54.01	52.61
CDY22326	Canola	cytosol	54.5	52.58
CDY69333	Canola	cytosol	52.8	52.04
CDY53200	Canola	golgi, peroxisome, plastid	54.01	51.63
CDY17153	Canola	peroxisome	54.74	51.61
CDY05502	Canola	cytosol, nucleus, peroxisome	55.47	51.47
CDY54895	Canola	cytosol, nucleus, peroxisome	55.47	51.47
CDY19798	Canola	cytosol, nucleus, peroxisome	55.96	51.45
CDY19472	Canola	cytosol, peroxisome, plastid	54.26	51.15
CDY61147	Canola	plastid	54.26	51.15
CDX89807	Canola	plastid	54.26	51.15
CDY62422	Canola	cytosol, nucleus, peroxisome	54.74	50.91
CDX80530	Canola	cytosol, nucleus, peroxisome	54.74	50.91
CDY50238	Canola	cytosol	38.69	47.75
CDX87078	Canola	extracellular	25.06	47.47
CDY65511	Canola	cytosol	38.69	47.32
CDY40617	Canola	cytosol, extracellular, peroxisome	40.63	43.38
CDX93705	Canola	cytosol, extracellular, peroxisome	40.39	43.12
CDX93703	Canola	cytosol, extracellular, peroxisome	40.15	42.86

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	GO:A0A078E7T3	EnsemblPlants:CDX97092	ProteinID:CDX97092	ProteinID:CDX97092.1
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00104074001	InterPro:IPR036188	PFAM:PF13738	PIRSF:PIRSF000332	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI0004EEA674
SEG:seg	:	:	:	:	:

Description

BnaC09g45330D

Coordinates

chrLK031897:-:605631..607888

Molecular Weight (calculated)

45616.4 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.060

Length

411 amino acids

Sequence
(BLAST)

001: MSSCLEEKHS RIFVTGPIIV GAGPSGLSVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMKFPRN FPRYPSKQQF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDVAS GLWTVKTQDV VYSSTWLVVA TGENAEPVIP DIPGLKKFTG PVVHTSAYKS GSEFANRKVL VVGCGNSGME VCLDLCRYNA
201: LPHMVVRNSV HVLPRDYFGL SSFGIAMTLL KWFPLKLVDN LLLLLASFSL GNTDRLGLRR PKTGPIELKN VTGKTPVLDV GAISLIQSGQ IRVTQAVKEI
301: TKKGAKFVNG QEMEFDSIIL ATGYKSNVPY WLKDNSFFTK EGMPKTPFPN GWKGENGLYT VGFTRRGLLG TAFDAVKIAE DITDQWMKMH GPLSSSNVCS
401: SHIIHFHFNK S

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.