CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040081.1-P	Field mustard	plastid	99.51	99.51
CDY39891	Canola	plastid	98.78	98.78
CDY71836	Canola	plastid	86.59	97.8
CDX68858	Canola	plastid	90.73	88.57
CDX75253	Canola	cytosol	90.24	88.52
AT4G32540.2	Thale cress	cytosol	87.8	86.54
PGSC0003DMT400067103	Potato	cytosol	55.85	68.56
Solyc06g065630.2.1	Tomato	cytosol	66.59	66.59
CDX85720	Canola	peroxisome	65.37	65.21
CDX97092	Canola	cytosol	65.37	65.21
VIT_04s0008g04870.t01	Wine grape	cytosol	58.54	64.69
CDY50808	Canola	peroxisome	53.66	63.95
KRH61831	Soybean	cytosol	63.17	63.95
KRH52507	Soybean	cytosol	62.2	63.43
KRH16035	Soybean	cytosol	60.0	62.92
GSMUA_AchrUn_...	Banana	peroxisome	51.46	61.52
KRH05083	Soybean	cytosol	60.73	61.33
GSMUA_Achr1P05290_001	Banana	peroxisome	51.46	59.27
CDY71529	Canola	cytosol, peroxisome	43.41	58.94
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	57.32	57.88
TraesCS3B01G261900.1	Wheat	cytosol	56.1	56.79
CDY14900	Canola	cytosol	53.17	56.19
HORVU3Hr1G057950.1	Barley	cytosol	55.61	56.16
TraesCS3A01G232600.1	Wheat	cytosol	55.61	55.75
TraesCS3D01G220500.1	Wheat	cytosol	55.61	55.75
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	55.61	54.55
OQU87233	Sorghum	cytosol	55.85	54.27
CDX94734	Canola	cytosol, peroxisome, plastid	55.37	53.29
CDY14230	Canola	cytosol	50.98	52.64
CDY72645	Canola	cytosol	43.9	52.63
CDY22326	Canola	cytosol	54.63	52.58
CDY69333	Canola	cytosol	53.17	52.28
CDX97452	Canola	cytosol	54.15	52.11
CDY35214	Canola	cytosol	53.9	51.88
CDY06876	Canola	cytosol	53.9	51.88
CDX89837	Canola	cytosol, peroxisome, plastid	52.93	51.67
CDY18209	Canola	cytosol, peroxisome, plastid	53.17	51.66
CDY10073	Canola	cytosol, peroxisome, plastid	52.93	51.54
CDY32533	Canola	cytosol	52.68	51.18
CDY53200	Canola	golgi, peroxisome, plastid	53.41	50.93
CDY19472	Canola	cytosol, peroxisome, plastid	54.15	50.92
CDY17153	Canola	peroxisome	53.9	50.69
CDY61147	Canola	plastid	53.41	50.23
CDX89807	Canola	plastid	53.41	50.23
CDY05502	Canola	cytosol, nucleus, peroxisome	51.46	47.63
CDY19798	Canola	cytosol, nucleus, peroxisome	51.71	47.43
CDY54895	Canola	cytosol, nucleus, peroxisome	51.22	47.4
CDX80530	Canola	cytosol, nucleus, peroxisome	50.49	46.83
CDY62422	Canola	cytosol, nucleus, peroxisome	50.24	46.61
CDY50238	Canola	cytosol	37.8	46.55
CDY65511	Canola	cytosol	38.05	46.43
CDX87078	Canola	extracellular	24.39	46.08
CDX93703	Canola	cytosol, extracellular, peroxisome	40.49	43.12
CDX93705	Canola	cytosol, extracellular, peroxisome	39.76	42.34
CDY40617	Canola	cytosol, extracellular, peroxisome	39.76	42.34

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	GO:A0A078GA68	UniProt:A0A078GA68	EnsemblPlants:CDY23330	ProteinID:CDY23330
ProteinID:CDY23330.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00021917001	InterPro:IPR036188
PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1
InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI0004EDB268	:	:

Description

BnaA08g12160DFlavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078GA68]

Coordinates

chrLK032142:+:548999..550818

Molecular Weight (calculated)

45230.9 Da

IEP (calculated)

9.936

GRAVY (calculated)

-0.137

Length

410 amino acids

Sequence
(BLAST)

001: MDSHSCHQTK QIILVHGPII IGAGPSGLAT SACLSSRGVS SLILERSDSI ASLWKSKTYD RLKLHLPKHY CRLPLLDFPE NFPKYPSKNE FLDYLESYAS
101: HFGIVPRFNE NVQNASYDSS SGLWRVKTLS GAEYLSKWLV VATGENADAY VPEVPGILKF SGGRIIHASE YKSGEEFRQQ KVLVVGCGNS GMEISLDLVR
201: HNASPHLVVR NTVHVLPREI LGLSTFGIGM TLLKCLPLRF VDKFLLLMAN LSFGNTDRLG LRRPKIGPLE LKNLTGKTPV LDVGAMTLIR SGKIQIMEGV
301: KEITKKGAKF MDGQEKEFDS IIFATGYKSN VPTWLQGSDF FTKEGMPKTP FPNSWRGGKG LYTVGFTRRG LLGTASDAVK IAGEIADQWR DIKGATKNLC
401: SSRFVIISKS

Best Arabidopsis Sequence Match ( AT4G32540.1 )
(BLAST)

001: MESHPHNKTD QTQHIILVHG PIIIGAGPSG LATSACLSSR GVPSLILERS DSIASLWKSK TYDRLRLHLP KHFCRLPLLD FPEYYPKYPS KNEFLAYLES
101: YASHFRIAPR FNKNVQNAAY DSSSGFWRVK THDNTEYLSK WLIVATGENA DPYFPEIPGR KKFSGGKIVH ASEYKSGEEF RRQKVLVVGC GNSGMEISLD
201: LVRHNASPHL VVRNTVHVLP REILGVSTFG VGMTLLKCLP LRLVDKFLLL MANLSFGNTD RLGLRRPKTG PLELKNVTGK SPVLDVGAMS LIRSGMIQIM
301: EGVKEITKKG AKFMDGQEKD FDSIIFATGY KSNVPTWLQG GDFFTDDGMP KTPFPNGWRG GKGLYTVGFT RRGLLGTASD AVKIAGEIGD QWRDEIKGST
401: RNMCSSRFVF TSKS

Arabidopsis Description

YUCFlavin-binding monooxygenase family protein [Source:TAIR;Acc:AT4G32540]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.