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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75253 Canola cytosol 98.33 98.8
CDY39891 Canola plastid 88.81 90.98
CDY71836 Canola plastid 78.57 90.91
CDY23330 Canola plastid 88.57 90.73
AT4G32540.2 Thale cress cytosol 86.19 87.02
PGSC0003DMT400067103 Potato cytosol 54.29 68.26
Solyc06g065630.2.1 Tomato cytosol 65.48 67.07
VIT_04s0008g04870.t01 Wine grape cytosol 59.05 66.85
CDX97092 Canola cytosol 63.57 64.96
KRH61831 Soybean cytosol 62.14 64.44
CDX85720 Canola peroxisome 62.86 64.23
KRH52507 Soybean cytosol 61.19 63.93
KRH16035 Soybean cytosol 59.05 63.43
CDY50808 Canola peroxisome 51.9 63.37
KRH05083 Soybean cytosol 60.48 62.56
GSMUA_AchrUn_... Banana peroxisome 50.0 61.22
GSMUA_Achr1P05290_001 Banana peroxisome 50.0 58.99
CDY71529 Canola cytosol, peroxisome 42.14 58.61
Os01t0645400-02 Rice cytosol, peroxisome, plastid 55.48 57.39
TraesCS3B01G261900.1 Wheat cytosol 54.52 56.54
HORVU3Hr1G057950.1 Barley cytosol 54.29 56.16
TraesCS3D01G220500.1 Wheat cytosol 53.81 55.26
TraesCS3A01G232600.1 Wheat cytosol 53.57 55.01
Zm00001d044069_P001 Maize cytosol, peroxisome, vacuole 54.52 54.78
OQU87233 Sorghum cytosol 55.0 54.74
CDY14900 Canola cytosol 50.24 54.38
CDX94734 Canola cytosol, peroxisome, plastid 54.05 53.29
CDY14230 Canola cytosol 49.76 52.64
CDY22326 Canola cytosol 52.86 52.11
CDY72645 Canola cytosol 42.38 52.05
CDY35214 Canola cytosol 52.62 51.88
CDX97452 Canola cytosol 52.62 51.88
CDY06876 Canola cytosol 52.62 51.88
CDX89837 Canola cytosol, peroxisome, plastid 51.67 51.67
CDY18209 Canola cytosol, peroxisome, plastid 51.67 51.42
CDY10073 Canola cytosol, peroxisome, plastid 51.43 51.31
CDY17153 Canola peroxisome 53.1 51.15
CDY32533 Canola cytosol 51.19 50.95
CDY19472 Canola cytosol, peroxisome, plastid 52.86 50.92
CDY69333 Canola cytosol 50.48 50.84
CDY53200 Canola golgi, peroxisome, plastid 51.43 50.23
CDY61147 Canola plastid 51.67 49.77
CDX89807 Canola plastid 51.67 49.77
CDY19798 Canola cytosol, nucleus, peroxisome 50.48 47.43
CDX80530 Canola cytosol, nucleus, peroxisome 49.76 47.29
CDY62422 Canola cytosol, nucleus, peroxisome 49.52 47.06
CDY05502 Canola cytosol, nucleus, peroxisome 49.52 46.95
CDY54895 Canola cytosol, nucleus, peroxisome 49.29 46.73
CDY50238 Canola cytosol 36.43 45.95
CDY65511 Canola cytosol 36.67 45.83
CDX87078 Canola extracellular 23.57 45.62
CDX93703 Canola cytosol, extracellular, peroxisome 39.05 42.6
CDX93705 Canola cytosol, extracellular, peroxisome 38.33 41.82
CDY40617 Canola cytosol, extracellular, peroxisome 38.33 41.82
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60GO:A0A078C169EnsemblPlants:CDX68858ProteinID:CDX68858ProteinID:CDX68858.1
InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004499
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0050660GO:GO:0050661
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00130583001InterPro:IPR036188PFAM:PF00743PRINTS:PR00368PRINTS:PR00469
PANTHER:PTHR43539PANTHER:PTHR43539:SF1InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI0004EED987:
Description
BnaC01g05950D
Coordinates
chrLK031789:+:1602152..1604083
Molecular Weight (calculated)
46312.2 Da
IEP (calculated)
9.847
GRAVY (calculated)
-0.167
Length
420 amino acids
Sequence
(BLAST)
001: MDSPPSPPLP LHQTDHQTKQ IILVHGSIII GAGPSGLATS ACLSNRGVPS LILERSDSIA SLWKTKTYDR LKLHLPKHFC RLPLLDFPEN FPKYPSKNEF
101: LDYLESYASH FGIVPRFNEN VVNAAFDTSS GLWRVKTLNK TEYLSKWLIV ATGENADAYV PETPGIVKFS GGKIIHASDY RSGEEFRQQR VLVVGCGNSG
201: MEISLDLVRH NASPHLVVRN TVHVLPREIL GLSTFGVGMT LLKCLPLRLV DKFLLLMANL SFGNTDRLGI HRPKTGPLEL KNVTGKSPVL DVGAMSLIRS
301: GKIKIMEGVK EITKNGAKFM DGQEKEFDSI IFATGYKSNV PTWLQGSDFF TKEGMPKTPF PNGWRGGKGL YTVGFTRRGL LGTASDAVNI AGEIADQWRD
401: EIKGPIKNMC SSRFVLISKS
Best Arabidopsis Sequence Match ( AT4G32540.1 )
(BLAST)
001: MESHPHNKTD QTQHIILVHG PIIIGAGPSG LATSACLSSR GVPSLILERS DSIASLWKSK TYDRLRLHLP KHFCRLPLLD FPEYYPKYPS KNEFLAYLES
101: YASHFRIAPR FNKNVQNAAY DSSSGFWRVK THDNTEYLSK WLIVATGENA DPYFPEIPGR KKFSGGKIVH ASEYKSGEEF RRQKVLVVGC GNSGMEISLD
201: LVRHNASPHL VVRNTVHVLP REILGVSTFG VGMTLLKCLP LRLVDKFLLL MANLSFGNTD RLGLRRPKTG PLELKNVTGK SPVLDVGAMS LIRSGMIQIM
301: EGVKEITKKG AKFMDGQEKD FDSIIFATGY KSNVPTWLQG GDFFTDDGMP KTPFPNGWRG GKGLYTVGFT RRGLLGTASD AVKIAGEIGD QWRDEIKGST
401: RNMCSSRFVF TSKS
Arabidopsis Description
YUCFlavin-binding monooxygenase family protein [Source:TAIR;Acc:AT4G32540]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.