CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61831	Soybean	cytosol	94.28	93.58
KRH05083	Soybean	cytosol	74.38	73.65
KRH16035	Soybean	cytosol	71.39	73.4
AT5G11320.1	Thale cress	cytosol	69.65	68.13
VIT_04s0008g04870.t01	Wine grape	cytosol	61.69	66.85
CDX97092	Canola	cytosol	67.91	66.42
Bra008971.1-P	Field mustard	cytosol	67.66	66.18
PGSC0003DMT400067103	Potato	cytosol	54.73	65.87
CDY50808	Canola	peroxisome	56.22	65.7
Bra023318.1-P	Field mustard	plastid	66.92	65.45
CDX85720	Canola	peroxisome	66.67	65.21
Solyc06g065630.2.1	Tomato	cytosol	65.17	63.9
Bra040081.1-P	Field mustard	plastid	63.93	62.68
CDY39891	Canola	plastid	63.93	62.68
CDY71836	Canola	plastid	56.47	62.53
AT4G32540.2	Thale cress	cytosol	64.43	62.26
CDY23330	Canola	plastid	63.43	62.2
GSMUA_AchrUn_...	Banana	peroxisome	52.99	62.1
Bra011354.1-P	Field mustard	cytosol	64.18	61.72
GSMUA_Achr1P05290_001	Banana	peroxisome	54.48	61.52
CDX75253	Canola	cytosol	63.68	61.24
CDX68858	Canola	plastid	63.93	61.19
TraesCS3B01G261900.1	Wheat	cytosol	58.46	58.02
HORVU3Hr1G057950.1	Barley	cytosol	58.46	57.88
TraesCS3D01G220500.1	Wheat	cytosol	58.46	57.46
CDY71529	Canola	cytosol, peroxisome	43.03	57.28
TraesCS3A01G232600.1	Wheat	cytosol	58.21	57.21
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	57.46	56.9
KRH16221	Soybean	cytosol, nucleus, peroxisome	58.96	54.36
OQU87233	Sorghum	cytosol	56.72	54.03
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	58.71	54.0
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	55.97	53.83
KRH60285	Soybean	cytosol	55.22	53.62
KRH04824	Soybean	cytosol, nucleus, peroxisome	57.46	52.74
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	57.46	52.5
KRH41577	Soybean	cytosol, nucleus, peroxisome	54.48	52.39
KRH32274	Soybean	cytosol	54.98	52.25
KRH39284	Soybean	peroxisome	55.97	52.2
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	54.73	52.01
KRH48393	Soybean	peroxisome	54.98	51.76
KRG95789	Soybean	cytosol, peroxisome, plastid	54.48	51.65
KRH67507	Soybean	cytosol, peroxisome, plastid	54.48	51.65
KRH33524	Soybean	cytosol, peroxisome, plastid	54.73	49.89
KRG90286	Soybean	cytosol, peroxisome, plastid	53.73	49.2
KRH53357	Soybean	extracellular	44.03	44.25
KRH64052	Soybean	vacuole	40.55	42.78
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	39.8	41.99
KRH68103	Soybean	cytosol	38.81	40.62
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	43.03	39.86
KRG96368	Soybean	cytosol	37.81	38.97

Protein Annotations

EntrezGene:100793803	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02003420	InterPro:FAD-bd	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_06G072100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	GO:GO:0071949	UniProt:I1K8Z1	InterPro:IPR036188	EnsemblPlants:KRH52507
ProteinID:KRH52507	ProteinID:KRH52507.1	PFAM:PF00743	PFAM:PF01494	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000233A17F	:

Description

hypothetical protein

Coordinates

chr6:+:5509065..5512168

Molecular Weight (calculated)

44594.4 Da

IEP (calculated)

9.792

GRAVY (calculated)

-0.097

Length

402 amino acids

Sequence
(BLAST)

001: MESLKAQEGG EEQVKCVWVH GPIIVGAGPS GLAVAACLSH HGVPYVILER TNCITSLWQH RTYDRLKLHL PKHFCELPLI PFPLHFPKYP SNSYASRFNI
101: RPRFNQSVQT AQFDPCSQLW VVKTNGFQYI SPWLVVATGE NAEPVVPSIS GMDKFRGPIV HTSVYKSGSD YKNQRVLVIG CGNSGMEVSL DLCRHNANPY
201: MVARNTVHVL PMEMFGFSTF GIAMALLKWL PIKLVDKLVL AAARLMLGDT ARYGVRRPKT GPIELKLVTG KTPVLDVGQV AQIRSGNIKV MEGVKEITRN
301: GAKFMDGQEK EFSAIILATG YKSNVPTWLK SCESFTKDGM PKTPFPMGWK GENGLYTVGF TRRGLLGTAS DAVKIAKDIA DQWMTVKDRS YCNSHIIFLK
401: ST

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.