Factsheet for Bra023318.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
peroxisome 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85720	Canola	peroxisome	99.03	99.03
Bra008971.1-P	Field mustard	cytosol	91.0	91.0
AT5G11320.1	Thale cress	cytosol	87.1	87.1
PGSC0003DMT400067103	Potato	cytosol	55.96	68.86
KRH61831	Soybean	cytosol	66.42	67.41
VIT_04s0008g04870.t01	Wine grape	cytosol	60.83	67.39
KRH16035	Soybean	cytosol	63.99	67.26
KRH52507	Soybean	cytosol	65.45	66.92
Solyc06g065630.2.1	Tomato	cytosol	66.67	66.83
KRH05083	Soybean	cytosol	65.94	66.75
Bra040081.1-P	Field mustard	plastid	65.69	65.85
Bra011354.1-P	Field mustard	cytosol	64.23	63.16
GSMUA_AchrUn_...	Banana	peroxisome	51.82	62.1
GSMUA_Achr1P05290_001	Banana	peroxisome	53.04	61.24
TraesCS3B01G261900.1	Wheat	cytosol	58.39	59.26
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	57.91	58.62
HORVU3Hr1G057950.1	Barley	cytosol	57.91	58.62
TraesCS3D01G220500.1	Wheat	cytosol	58.15	58.44
TraesCS3A01G232600.1	Wheat	cytosol	57.42	57.7
OQU87233	Sorghum	cytosol	57.18	55.69
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	56.45	55.5
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	52.55	54.14
Bra011055.1-P	Field mustard	cytosol	55.96	53.99
Bra010354.1-P	Field mustard	cytosol	54.74	52.82
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	53.53	52.38
Bra032499.1-P	Field mustard	cytosol	52.8	51.42
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	53.28	51.41
Bra036547.1-P	Field mustard	cytosol	54.99	51.25
Bra032524.1-P	Field mustard	cytosol	52.55	51.18
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	53.77	51.16
Bra020509.1-P	Field mustard	cytosol	54.01	50.8
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	53.53	50.46
Bra015334.1-P	Field mustard	plastid	53.28	50.23
Bra017913.1-P	Field mustard	cytosol	42.82	46.56
Bra018761.1-P	Field mustard	cytosol, extracellular, peroxisome	23.36	43.84
Bra018763.1-P	Field mustard	cytosol, extracellular, peroxisome	26.76	43.14

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra023318	EnsemblPlants:Bra023318.1	EnsemblPlants:Bra023318.1-P	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	UniProt:M4E3G6	PFAM:PF13738	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000254333C	:

Description

AT5G11320 (E=2e-212) YUC4 | YUC4 (YUCCA4); monooxygenase/ oxidoreductase

Coordinates

chrA02:-:2810316..2812396

Molecular Weight (calculated)

45552.4 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.072

Length

411 amino acids

Sequence
(BLAST)

001: MSSCLEAEHS PIFVNGPIIV GAGPSGLSVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMKFPKN FPRYPSKQQF ISYIESYAAR
101: FNIKPVFNQP VEKAEFDVVS CLWKVKTQDA VYTSKWLVVA TGENAEPVVP DIPGLKNFTG PVVHTSAYKS GSEFANRKVL VVGCGNSGME VCLDLCRYNA
201: LPHMVVRNPL HVLPRDFFGL SSFGIAMTLL KWFPLKLVDN FLLLLANSYL GNTDRLGLRR PKTGPIELKN ATGKTPVLDV GAISLIQSGQ IRVRHAVKEL
301: TKKGAKFVDG QEMEFESIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGENGLYT VGFTKRGLLG TAFDAVKIAE DITDQWMKSN GPLSASNICS
401: SCIIHFHFNK S

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.