CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	88.15	89.0
HORVU3Hr1G057950.1	Barley	cytosol	77.25	80.3
TraesCS3D01G220500.1	Wheat	cytosol	77.73	80.2
TraesCS3B01G261900.1	Wheat	cytosol	76.54	79.75
TraesCS3A01G232600.1	Wheat	cytosol	77.25	79.71
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	74.88	77.83
GSMUA_Achr1P05290_001	Banana	peroxisome	56.4	66.85
GSMUA_AchrUn_...	Banana	peroxisome	53.32	65.6
PGSC0003DMT400067103	Potato	cytosol	48.1	60.78
Solyc06g065630.2.1	Tomato	cytosol	57.35	59.02
CDY71836	Canola	plastid	50.24	58.4
KRH61831	Soybean	cytosol	55.92	58.27
AT5G11320.1	Thale cress	cytosol	56.64	58.15
CDX97092	Canola	cytosol	56.4	57.91
Bra008971.1-P	Field mustard	cytosol	56.16	57.66
Bra023318.1-P	Field mustard	plastid	55.69	57.18
VIT_04s0008g04870.t01	Wine grape	cytosol	50.24	57.14
KRH16035	Soybean	cytosol	52.84	57.03
CDX85720	Canola	peroxisome	55.45	56.93
KRH52507	Soybean	cytosol	54.03	56.72
CDY50808	Canola	peroxisome	46.21	56.69
Bra040081.1-P	Field mustard	plastid	54.74	56.34
KRH05083	Soybean	cytosol	54.03	56.16
CDY39891	Canola	plastid	54.5	56.1
CDY23330	Canola	plastid	54.27	55.85
AT4G32540.2	Thale cress	cytosol	54.98	55.77
Bra011354.1-P	Field mustard	cytosol	54.98	55.5
CDX75253	Canola	cytosol	54.74	55.26
CDX68858	Canola	plastid	54.74	55.0
KXG33311	Sorghum	cytosol	55.69	53.9
KXG35000	Sorghum	plastid	53.55	53.18
EES16059	Sorghum	cytosol	55.92	52.68
EES02224	Sorghum	peroxisome	52.84	52.35
EES11777	Sorghum	cytosol, peroxisome, plastid	51.42	51.42
OQU93186	Sorghum	cytosol	52.84	51.26
CDY71529	Canola	cytosol, peroxisome	34.83	48.68
OQU79511	Sorghum	cytosol	49.29	46.12
OQU78863	Sorghum	extracellular	41.47	45.57
EES15155	Sorghum	peroxisome	47.63	45.37
EES08387	Sorghum	extracellular, plasma membrane	39.57	44.41
KXG32253	Sorghum	cytosol, peroxisome, vacuole	42.65	44.34
EES08388	Sorghum	extracellular	37.91	44.32
OQU88910	Sorghum	plastid	18.48	34.36

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	UniProt:A0A1W0VYM9	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	EnsemblPlants:OQU87233	ProteinID:OQU87233	ProteinID:OQU87233.1	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	InterPro:Pyridine_nuc-diS_OxRdtase_2	EnsemblPlantsGene:SORBI_3003G236900
SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI0009DC882F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:57607592..57610741

Molecular Weight (calculated)

45135.6 Da

IEP (calculated)

9.004

GRAVY (calculated)

-0.080

Length

422 amino acids

Sequence
(BLAST)

001: MDMDDDMARQ QEEEQGRARA AWVPGAVIVG AGPSGLAAAA CLAARGVPAT VLEMSDSLAS TWRHRTYDRL TLHLPKRFCE LPLLPFPPGY PAYPSKDQFV
101: AYLESYAAAA GVAPRFGCRV EEAAFDAGAG AWAVRVAGEG EGSGGELLLL ARWLVVATGE NAVPRTPDLP GAPERFAGRV LHTCDYKSGE EFAGKKVLVV
201: GCGNSGMEVS LDLCRHGATP SMVVRNTVHV LPREMLGVST FGIAMALLKL LPVQVVDRIL LAAARLALGD TGKLGLRRPK TGPIELKNLT GRTPVLDVGT
301: LAHIKTGKIK VVGAVKEVTQ RGVRFADGKE EQFDAIIQAT GYRSNVPSWL KDGGDVFTRE GMPRIPFPNG WKGKNGLYTV GFSQRGLLGA SADALNIARD
401: IHSQWKQDMM SRPAGNKYCA SM

Best Arabidopsis Sequence Match ( AT4G32540.1 )
(BLAST)

001: MESHPHNKTD QTQHIILVHG PIIIGAGPSG LATSACLSSR GVPSLILERS DSIASLWKSK TYDRLRLHLP KHFCRLPLLD FPEYYPKYPS KNEFLAYLES
101: YASHFRIAPR FNKNVQNAAY DSSSGFWRVK THDNTEYLSK WLIVATGENA DPYFPEIPGR KKFSGGKIVH ASEYKSGEEF RRQKVLVVGC GNSGMEISLD
201: LVRHNASPHL VVRNTVHVLP REILGVSTFG VGMTLLKCLP LRLVDKFLLL MANLSFGNTD RLGLRRPKTG PLELKNVTGK SPVLDVGAMS LIRSGMIQIM
301: EGVKEITKKG AKFMDGQEKD FDSIIFATGY KSNVPTWLQG GDFFTDDGMP KTPFPNGWRG GKGLYTVGFT RRGLLGTASD AVKIAGEIGD QWRDEIKGST
401: RNMCSSRFVF TSKS

Arabidopsis Description

YUCFlavin-binding monooxygenase family protein [Source:TAIR;Acc:AT4G32540]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.