CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52507	Soybean	cytosol	93.58	94.28
KRH16035	Soybean	cytosol	72.35	74.94
KRH05083	Soybean	cytosol	74.81	74.63
VIT_04s0008g04870.t01	Wine grape	cytosol	62.72	68.46
AT5G11320.1	Thale cress	cytosol	69.38	68.37
PGSC0003DMT400067103	Potato	cytosol	56.3	68.26
CDX97092	Canola	cytosol	68.4	67.4
Bra008971.1-P	Field mustard	cytosol	68.15	67.15
CDY50808	Canola	peroxisome	57.04	67.15
Bra023318.1-P	Field mustard	plastid	67.41	66.42
CDX85720	Canola	peroxisome	66.91	65.94
Solyc06g065630.2.1	Tomato	cytosol	66.67	65.85
GSMUA_AchrUn_...	Banana	peroxisome	54.32	64.14
CDY39891	Canola	plastid	64.44	63.66
Bra040081.1-P	Field mustard	plastid	64.44	63.66
CDY71836	Canola	plastid	57.04	63.64
CDY23330	Canola	plastid	63.95	63.17
GSMUA_Achr1P05290_001	Banana	peroxisome	55.06	62.64
Bra011354.1-P	Field mustard	cytosol	64.44	62.44
AT4G32540.2	Thale cress	cytosol	63.95	62.26
CDX75253	Canola	cytosol	64.2	62.2
CDX68858	Canola	plastid	64.44	62.14
TraesCS3B01G261900.1	Wheat	cytosol	59.01	59.01
CDY71529	Canola	cytosol, peroxisome	43.95	58.94
HORVU3Hr1G057950.1	Barley	cytosol	58.77	58.62
TraesCS3D01G220500.1	Wheat	cytosol	59.01	58.44
TraesCS3A01G232600.1	Wheat	cytosol	58.77	58.19
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	58.02	57.88
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	57.78	55.98
KRH16221	Soybean	cytosol, nucleus, peroxisome	60.25	55.96
OQU87233	Sorghum	cytosol	58.27	55.92
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	59.26	54.92
KRH60285	Soybean	cytosol	55.8	54.59
KRH04824	Soybean	cytosol, nucleus, peroxisome	58.77	54.34
KRH39284	Soybean	peroxisome	57.04	53.6
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	58.02	53.41
KRH41577	Soybean	cytosol, nucleus, peroxisome	55.06	53.35
KRH48393	Soybean	peroxisome	56.05	53.16
KRH32274	Soybean	cytosol	55.31	52.96
KRH67507	Soybean	cytosol, peroxisome, plastid	55.31	52.83
KRG95789	Soybean	cytosol, peroxisome, plastid	55.31	52.83
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.06	52.72
KRH33524	Soybean	cytosol, peroxisome, plastid	55.8	51.25
KRG90286	Soybean	cytosol, peroxisome, plastid	54.81	50.57
KRH53357	Soybean	extracellular	44.69	45.25
KRH64052	Soybean	vacuole	41.48	44.09
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	40.74	43.31
KRH68103	Soybean	cytosol	40.0	42.19
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	43.7	40.78
KRG96368	Soybean	cytosol	38.77	40.26

Protein Annotations

EntrezGene:100789347	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	UniProt:A0A0R0K554	EMBL:ACUP02002190	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase	EnsemblPlantsGene:GLYMA_04G070100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR036188	EnsemblPlants:KRH61831	ProteinID:KRH61831	ProteinID:KRH61831.1	PFAM:PF13738
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PFscan:PS51257	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1
InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI0006ED7C72	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:5861538..5864587

Molecular Weight (calculated)

45092.0 Da

IEP (calculated)

9.916

GRAVY (calculated)

-0.105

Length

405 amino acids

Sequence
(BLAST)

001: MESLKGEEVK CVWVQGPIIV GAGPSGLAVA ACLSHHGVPY VILERSHCIT SLWQHRTYDR LKLHLPKHFC ELPLMPFPLH FPKYPSKNQF ISYLNSYASR
101: FNIRPRFNQS VQTAEFDPSS QLWLVRTNGF QYISPWLVVA TGENAEPVVP SISGMDMFHG PIVHTSVYKS GSDYNNQRVL VIGCGNSGME VSLDLCRHNA
201: NPYMVARNTV HVLPREMFGF STFGIAMALL KWLPIKVVDK LVLAAARLML GDTARYGVRR PKTGPIELKL VTGKTPVLDV GQVAQIRSGN IKVMEGVKEI
301: TRNGAKFMDG QEKEFSAIIL ATGYKSNVPT WLKSCESFTK DGMPKTPFPM GWKGENGLYT VGFTRRGLLG TASDAVKIAK DIADQWMTVK DKSYRNSHII
401: LLKST

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.