CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
plastid 1
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11076
KRH21197
KRH22653
KRH26664
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	KRH11076	AT4G19030.1	21798944
AT4G28720.1	KRH21197	AT4G19030.1	21798944
AT4G28720.1	KRH42923	AT4G19030.1	21798944
AT4G28720.1	KRH42926	AT4G19030.1	21798944
AT4G28720.1	KRH45251	AT4G19030.1	21798944
AT4G28720.1	KRH59035	AT4G19030.1	21798944
AT4G28720.1	KRH59036	AT4G19030.1	21798944
AT4G28720.1	KRH22653	AT5G22290.1	21798944
AT4G28720.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32274	Soybean	cytosol	97.16	97.16
KRG95789	Soybean	cytosol, peroxisome, plastid	85.58	85.38
KRH67507	Soybean	cytosol, peroxisome, plastid	84.87	84.67
VIT_07s0005g04800.t01	Wine grape	cytosol	78.25	78.07
Bra011055.1-P	Field mustard	cytosol	75.41	74.88
CDY35214	Canola	cytosol	75.41	74.88
CDY72645	Canola	cytosol	60.52	74.85
CDY06876	Canola	cytosol	75.18	74.65
AT4G28720.1	Thale cress	cytosol	74.94	74.41
Bra010354.1-P	Field mustard	cytosol	74.94	74.41
CDY14230	Canola	cytosol	69.74	74.31
CDX97452	Canola	cytosol	74.47	73.94
PGSC0003DMT400038139	Potato	peroxisome	69.74	72.3
GSMUA_Achr11P...	Banana	cytosol	59.57	72.21
CDY14900	Canola	cytosol	66.19	72.16
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	70.69	72.05
Solyc06g008050.2.1	Tomato	peroxisome	69.98	72.02
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	67.85	71.93
PGSC0003DMT400051713	Potato	cytosol	70.69	71.88
Solyc06g083700.2.1	Tomato	cytosol	70.69	71.88
Solyc09g064160.2.1	Tomato	cytosol	70.45	71.81
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	71.16	71.67
CDX89837	Canola	cytosol, peroxisome, plastid	71.16	71.67
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	57.21	71.6
AT1G04180.1	Thale cress	cytosol	71.16	71.5
CDY18209	Canola	cytosol, peroxisome, plastid	71.16	71.33
AT5G43890.1	Thale cress	cytosol	71.39	71.23
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	71.63	71.13
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	63.83	71.05
CDY10073	Canola	cytosol, peroxisome, plastid	70.69	71.02
CDY22326	Canola	cytosol	71.39	70.89
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	60.52	70.52
CDX94734	Canola	cytosol, peroxisome, plastid	70.92	70.42
CDY32533	Canola	cytosol	70.21	70.38
CDY69333	Canola	cytosol	69.27	70.26
Bra032524.1-P	Field mustard	cytosol	69.98	70.14
KRG90286	Soybean	cytosol, peroxisome, plastid	71.39	68.79
KRH33524	Soybean	cytosol, peroxisome, plastid	71.39	68.48
GSMUA_Achr1P03360_001	Banana	peroxisome	55.32	68.02
GSMUA_Achr4P25050_001	Banana	cytosol	60.52	67.72
TraesCS2A01G011500.1	Wheat	plastid	65.01	65.79
Os04t0128900-01	Rice	peroxisome	64.78	65.39
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	65.01	65.32
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	65.01	65.32
GSMUA_Achr1P24210_001	Banana	cytosol	58.39	65.17
GSMUA_Achr2P04250_001	Banana	cytosol	58.39	65.17
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	64.78	65.08
GSMUA_AchrUn_...	Banana	mitochondrion	60.28	64.72
EES11777	Sorghum	cytosol, peroxisome, plastid	64.3	64.45
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	36.88	62.9
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	55.56	62.33
TraesCS2B01G562800.1	Wheat	mitochondrion	59.1	60.1
TraesCS2A01G533200.1	Wheat	mitochondrion	59.1	60.1
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	48.94	59.83
Os07t0437000-01	Rice	mitochondrion	56.26	59.8
TraesCS2D01G535100.1	Wheat	mitochondrion	58.63	59.62
KRH16221	Soybean	cytosol, nucleus, peroxisome	60.52	58.72
Zm00001d005439_P001	Maize	plastid	55.08	58.54
HORVU2Hr1G001820.1	Barley	plastid	64.78	58.17
TraesCS4A01G313200.1	Wheat	mitochondrion	56.26	58.05
KRH04824	Soybean	cytosol, nucleus, peroxisome	59.57	57.53
HORVU5Hr1G125560.2	Barley	mitochondrion	56.26	57.49
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	58.63	56.75
KXG35000	Sorghum	plastid	56.5	56.24
KRH48393	Soybean	peroxisome	56.5	55.97
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	57.92	55.68
KRH60285	Soybean	cytosol	54.37	55.56
KRH39284	Soybean	peroxisome	56.5	55.45
KRH61831	Soybean	cytosol	52.72	55.06
KRH16035	Soybean	cytosol	50.59	54.73
KRH52507	Soybean	cytosol	52.01	54.73
KRH41577	Soybean	cytosol, nucleus, peroxisome	53.66	54.31
KRH05083	Soybean	cytosol	51.77	53.94
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	57.21	53.07
Zm00001d005602_P001	Maize	endoplasmic reticulum	25.3	52.2
HORVU2Hr1G116980.1	Barley	plastid	58.63	51.88
EES15155	Sorghum	peroxisome	53.43	51.02
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	56.26	50.64
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	25.3	49.08
KRG96368	Soybean	cytosol	43.03	46.67
KRH68103	Soybean	cytosol	40.9	45.05
KRH53357	Soybean	extracellular	41.61	44.0
KRH64052	Soybean	vacuole	39.48	43.83
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	38.06	42.26
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	41.37	40.32
Zm00001d019527_P005	Maize	peroxisome	38.06	37.44
OQU88910	Sorghum	plastid	19.39	36.12
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	52.25	27.12
HORVU7Hr1G007860.1	Barley	cytosol	53.19	27.08

Protein Annotations

EntrezGene:100798190	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02008197	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like
EnsemblPlantsGene:GLYMA_13G128800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	UniProt:I1LYR4	InterPro:IPR036188	EnsemblPlants:KRH19661	ProteinID:KRH19661	ProteinID:KRH19661.1
PFAM:PF00743	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	UniParc:UPI000233AAC9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:24198202..24200638

Molecular Weight (calculated)

47562.6 Da

IEP (calculated)

8.621

GRAVY (calculated)

-0.202

Length

423 amino acids

Sequence
(BLAST)

001: MENLFRLVDY EDMFSKRCIW VNGPVIVGAG PSGLATAACL KQQGVPFMVL ERAECIASLW QKRTYDRLKL HLPKQFCQLP NLPFPKDFPE YPTKKHFIDY
101: LESYAQKFEI NPRFNECVQC ARYDETSGLW RVKTVATCGS AKSEFEYICR WLVVATGENA ECVIPDIEGL GEFKGDVIHA CEYKSGESFK GKKVVVVGCG
201: NSGMELSLDL CNHNASPSMV VRSSVHVLPR EVFGKSTFEL AVLMLQWLPL WLVDKILLVL TWLVLGNMER FGLKRPSEGP LLLKNTKGKT PVLDIGTLEK
301: IRSGDIKVVP EIKRFSNGYV EFVNGEKQGV DAVVLATGYR SNVPSWLQEG EFFSKNGFPK SPFPNGWKGN AGLYAVGFTR RGLSGASSDA MNIAQDIDQV
401: WKQETRQKKQ RTTACHRRCI SQF

Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)

001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF

Arabidopsis Description

YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.