Factsheet for GSMUA_Achr2P04250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	82.32	82.76
GSMUA_Achr1P24210_001	Banana	cytosol	77.84	77.84
GSMUA_AchrUn_...	Banana	mitochondrion	75.73	72.84
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	63.85	71.6
GSMUA_Achr11P...	Banana	cytosol	65.17	70.77
GSMUA_Achr1P03360_001	Banana	peroxisome	63.32	69.77
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	68.34	68.16
GSMUA_Achr4P25050_001	Banana	cytosol	67.81	67.99
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	64.91	67.77
CDY72645	Canola	cytosol	55.15	61.11
KRG95789	Soybean	cytosol, peroxisome, plastid	67.28	60.14
VIT_07s0005g04800.t01	Wine grape	cytosol	67.02	59.91
KRH67507	Soybean	cytosol, peroxisome, plastid	66.75	59.67
KRH32274	Soybean	cytosol	65.96	59.1
Os04t0128900-01	Rice	peroxisome	65.17	58.95
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	65.17	58.39
Solyc09g064160.2.1	Tomato	cytosol	63.59	58.07
PGSC0003DMT400038139	Potato	peroxisome	62.27	57.84
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	63.32	57.83
Solyc06g008050.2.1	Tomato	peroxisome	62.53	57.66
KRH33524	Soybean	cytosol, peroxisome, plastid	67.02	57.6
PGSC0003DMT400030255	Potato	cytosol	63.32	57.28
KRG90286	Soybean	cytosol, peroxisome, plastid	66.23	57.18
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	63.32	57.01
Solyc06g083700.2.1	Tomato	cytosol	62.53	56.97
TraesCS2A01G011500.1	Wheat	plastid	62.8	56.94
Bra032499.1-P	Field mustard	cytosol	63.32	56.87
PGSC0003DMT400051713	Potato	cytosol	62.27	56.73
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	62.8	56.53
CDY14900	Canola	cytosol	57.78	56.44
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	59.37	56.39
CDY14230	Canola	cytosol	58.84	56.17
AT5G43890.1	Thale cress	cytosol	62.8	56.13
EES11777	Sorghum	cytosol, peroxisome, plastid	62.27	55.92
CDX94734	Canola	cytosol, peroxisome, plastid	62.8	55.87
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	62.01	55.82
AT2G33230.1	Thale cress	plastid	63.32	55.68
Solyc09g091090.1.1	Tomato	peroxisome	63.32	55.68
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	62.53	55.63
CDY61147	Canola	plastid	63.85	55.5
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	61.48	55.48
CDX89837	Canola	cytosol, peroxisome, plastid	61.48	55.48
Bra011055.1-P	Field mustard	cytosol	62.27	55.4
CDY22326	Canola	cytosol	62.27	55.4
CDY35214	Canola	cytosol	62.27	55.4
CDY69333	Canola	cytosol	60.95	55.4
Bra015334.1-P	Field mustard	plastid	63.59	55.28
CDX89807	Canola	plastid	63.59	55.28
CDY18209	Canola	cytosol, peroxisome, plastid	61.48	55.21
CDY06876	Canola	cytosol	62.01	55.16
AT1G04180.1	Thale cress	cytosol	61.21	55.11
CDY32533	Canola	cytosol	61.21	54.98
AT4G28720.1	Thale cress	cytosol	61.74	54.93
Bra010354.1-P	Field mustard	cytosol	61.74	54.93
CDY53200	Canola	golgi, peroxisome, plastid	62.27	54.88
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	63.06	54.82
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	51.45	54.78
Os07t0437000-01	Rice	mitochondrion	57.52	54.77
Bra032524.1-P	Field mustard	cytosol	60.95	54.74
CDX97452	Canola	cytosol	61.48	54.69
CDY10073	Canola	cytosol, peroxisome, plastid	60.69	54.63
CDY19472	Canola	cytosol, peroxisome, plastid	62.8	54.59
CDY17153	Canola	peroxisome	62.53	54.36
AT1G04610.1	Thale cress	cytosol	62.53	54.23
GSMUA_Achr1P05290_001	Banana	peroxisome	50.4	53.65
TraesCS2B01G562800.1	Wheat	mitochondrion	58.84	53.61
TraesCS2A01G533200.1	Wheat	mitochondrion	58.58	53.37
GSMUA_AchrUn_...	Banana	peroxisome	48.28	53.35
TraesCS2D01G535100.1	Wheat	mitochondrion	58.31	53.12
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	61.21	52.97
Zm00001d005439_P001	Maize	plastid	55.15	52.51
GSMUA_Achr4P03480_001	Banana	extracellular	49.87	51.5
KXG35000	Sorghum	plastid	57.26	51.06
TraesCS4A01G313200.1	Wheat	mitochondrion	55.15	50.98
HORVU2Hr1G001820.1	Barley	plastid	62.53	50.32
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	45.65	50.0
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	28.76	50.0
HORVU5Hr1G125560.2	Barley	mitochondrion	54.35	49.76
GSMUA_Achr2P19930_001	Banana	cytosol	54.09	49.52
GSMUA_Achr9P05490_001	Banana	cytosol	53.3	48.44
GSMUA_Achr5P06860_001	Banana	peroxisome	54.88	48.26
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	50.13	47.86
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	55.15	47.18
HORVU2Hr1G116980.1	Barley	plastid	58.05	46.03
GSMUA_Achr4P03000_001	Banana	mitochondrion	45.65	46.01
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	29.82	45.56
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	55.67	44.89
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	46.17	43.64
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	52.51	43.64
EES15155	Sorghum	peroxisome	50.66	43.34
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	38.26	42.52
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	39.84	41.83
GSMUA_Achr8P00130_001	Banana	plasma membrane	38.26	40.85
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	33.77	38.1
GSMUA_Achr6P17640_001	Banana	plastid	31.13	36.42
Zm00001d005602_P001	Maize	endoplasmic reticulum	18.47	34.15
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	28.5	33.64
Zm00001d019527_P005	Maize	peroxisome	33.77	29.77
OQU88910	Sorghum	plastid	15.3	25.55
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	49.87	23.19
HORVU7Hr1G007860.1	Barley	cytosol	50.66	23.1

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G04250_001	EnsemblPlants:GSMUA_Achr2P04250_001
EnsemblPlants:GSMUA_Achr2T04250_001	InterPro:IPR036188	UniProt:M0S516	PFAM:PF00743	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000296280F	:

Description

flavin monooxygenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G04250_001]

Coordinates

chr2:-:9704685..9706355

Molecular Weight (calculated)

42006.8 Da

IEP (calculated)

9.362

GRAVY (calculated)

-0.200

Length

379 amino acids

Sequence
(BLAST)

001: MAGLAEHENL FKRRCKWVNG PLIVGAGPSG LAVAACLKEH GVPFYPSKNQ FIDYLESYAR HFQLNPQFDE TVLSAKYDST CGMWRVRTAV GRRQAVGRKA
101: EAEYICQWLV VATGENADCV IPEMEGLEKF GGRVIHSSDY RSGEAYRGKQ VLVVGCGNSG MEVAFDLCHH NAFPTMVVRD SVHVLPRETL GRSTFELAVS
201: LMKWLPLKMV DRVLLALSWM TLGNIEKLGI KRPSQGPLEL KNTQGKTPVL DIGALSKIKS GEIKVVPGVK RFLHGKAELV DHTIIDVDSV ILATGYRSNV
301: HSWLQGTDFF NKDGFPRHPF PNGWKGSSGL YAVGFTRRGL SGASLDAVKI AEDIGRVWKE ETRQAKHIIA CHRRCTSQN

Best Arabidopsis Sequence Match ( AT2G33230.1 )
(BLAST)

001: MCNNNNTSCV NISSMLQPED IFSRRCIWVN GPVIVGAGPS GLAVAADLKR QEVPFVILER ANCIASLWQN RTYDRLKLHL PKQFCQLPNL PFPEDIPEYP
101: TKYQFIEYLE SYATHFDLRP KFNETVQSAK YDKRFGLWRV QTVLRSELLG YCEFEYICRW LVVATGENAE KVVPEFEGLE DFGGDVLHAG DYKSGERYRG
201: KRVLVVGCGN SGMEVSLDLC NHDASPSMVV RSSVHVLPRE VLGKSTFELS VTMMKWMPVW LVDKTLLVLT RLLLGNTDKY GLKRPEIGPL ELKNTAGKTP
301: VLDIGAISMI KSGKIKIVAG IAKFGPGKVE LVDGRVLQID SVILATGYRS NVPSWLKEND LGEIGIEKNP FPKGWKGKAG LYAVGFTGRG LSGASFDAMS
401: VAHDIANSWK EETKQQIKTV ATRHRRCISH F

Arabidopsis Description

YUC7Probable indole-3-pyruvate monooxygenase YUCCA7 [Source:UniProtKB/Swiss-Prot;Acc:O49312]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.