Factsheet for PGSC0003DMT400030255

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g091090.1.1	Tomato	peroxisome	98.33	95.59
PGSC0003DMT400038139	Potato	peroxisome	68.02	69.85
KRH33524	Soybean	cytosol, peroxisome, plastid	73.51	69.84
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	72.79	69.63
Bra032499.1-P	Field mustard	cytosol	69.69	69.19
KRG90286	Soybean	cytosol, peroxisome, plastid	72.31	69.02
AT2G33230.1	Thale cress	plastid	70.17	68.21
CDY53200	Canola	golgi, peroxisome, plastid	69.69	67.91
PGSC0003DMT400051713	Potato	cytosol	67.06	67.55
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	66.83	67.47
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	70.17	67.43
AT1G04610.1	Thale cress	cytosol	70.17	67.28
GSMUA_Achr1P03360_001	Banana	peroxisome	55.13	67.15
Bra015334.1-P	Field mustard	plastid	69.69	66.97
CDX89807	Canola	plastid	69.69	66.97
CDY19472	Canola	cytosol, peroxisome, plastid	69.69	66.97
CDY17153	Canola	peroxisome	69.45	66.74
CDY61147	Canola	plastid	69.45	66.74
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	57.52	66.39
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	53.46	66.27
GSMUA_Achr11P...	Banana	cytosol	55.13	66.19
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	59.19	65.26
GSMUA_Achr4P25050_001	Banana	cytosol	58.0	64.29
GSMUA_Achr2P04250_001	Banana	cytosol	57.28	63.32
GSMUA_AchrUn_...	Banana	mitochondrion	58.71	62.44
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	56.09	62.33
GSMUA_Achr1P24210_001	Banana	cytosol	55.37	61.21
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	36.04	60.89
Os07t0437000-01	Rice	mitochondrion	56.32	59.3
EES11777	Sorghum	cytosol, peroxisome, plastid	59.67	59.24
Os04t0128900-01	Rice	peroxisome	58.95	58.95
Zm00001d005439_P001	Maize	plastid	55.85	58.79
PGSC0003DMT400067103	Potato	cytosol	46.78	58.68
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	58.71	58.43
TraesCS2A01G011500.1	Wheat	plastid	58.23	58.37
PGSC0003DMT400037628	Potato	cytosol	57.76	58.03
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	58.23	57.96
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	58.0	57.72
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	46.54	56.36
KXG35000	Sorghum	plastid	56.56	55.76
TraesCS2A01G533200.1	Wheat	mitochondrion	55.13	55.53
TraesCS4A01G313200.1	Wheat	mitochondrion	54.18	55.37
HORVU5Hr1G125560.2	Barley	mitochondrion	54.42	55.07
TraesCS2D01G535100.1	Wheat	mitochondrion	54.65	55.05
TraesCS2B01G562800.1	Wheat	mitochondrion	54.65	55.05
HORVU2Hr1G001820.1	Barley	plastid	58.23	51.8
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	53.7	49.34
EES15155	Sorghum	peroxisome	50.84	48.08
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	53.7	47.87
HORVU2Hr1G116980.1	Barley	plastid	54.42	47.7
Zm00001d005602_P001	Maize	endoplasmic reticulum	21.72	44.39
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	22.91	44.04
PGSC0003DMT400090184	Potato	cytosol	22.91	41.74
PGSC0003DMT400094923	Potato	extracellular	37.23	40.94
PGSC0003DMT400088054	Potato	cytosol	30.55	40.89
PGSC0003DMT400092778	Potato	extracellular, peroxisome, plasma membrane	32.22	40.54
PGSC0003DMT400097007	Potato	cytosol, peroxisome, plastid	37.23	40.41
Zm00001d019527_P005	Maize	peroxisome	38.66	37.67
OQU88910	Sorghum	plastid	19.81	36.56
PGSC0003DMT400085760	Potato	cytosol, nucleus, peroxisome	20.29	35.27
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	46.78	24.05
HORVU7Hr1G007860.1	Barley	cytosol	46.78	23.59

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
UniProt:M1ATX8	PFAM:PF00743	EnsemblPlantsGene:PGSC0003DMG400011572	PGSC:PGSC0003DMG400011572	EnsemblPlants:PGSC0003DMT400030255	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF10	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
UniParc:UPI000295395E	:	:	:	:	:

Description

Flavin monooxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400011572]

Coordinates

chr9:+:57576018..57578200

Molecular Weight (calculated)

46623.6 Da

IEP (calculated)

8.404

GRAVY (calculated)

-0.104

Length

419 amino acids

Sequence
(BLAST)

001: MVHELEQEDL FAGRCILVNG PVIIGAGPSG LAVGAGLKQQ GVPFVILDRA NCIASLWQNR TYDRLKLHLP RQFCELPYFP FPQNFPEYPT KYQFISYLES
101: YAKNFEISPR FNESVHSAKY DETCGLWRLK TVCRNGSVIE YICRWLVVAT GENAEKVVPE FEGLEDFGGH IMHACDYKTG EVYEGKNVLV VGCGNSGMEV
201: SLDLCHHNAS PSMVVRSSVH VLPREILGKS TFELGVSMMK WLSIDVVDKI LLVAARLLLG NIEKYGLKRP SIGPLQLKNT EGKTPVLDIG ALQKIKTGDI
301: KIVPAIKKFS QGKVEFVNGE IQEIDCIILA TGYCSNVPSW LKESEFFSRE GFPRSPFPNG WKGKAGLYAV GFTRRGLSGA SLDAIKVSQD IGKIWKEEIK
401: QKNQSVAVAC HRRSKLPSF

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.