Factsheet for Os04t0128900-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11777	Sorghum	cytosol, peroxisome, plastid	82.1	81.52
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	81.15	80.76
TraesCS2A01G011500.1	Wheat	plastid	80.43	80.62
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	80.43	80.05
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	79.95	79.57
TraesCS2B01G562800.1	Wheat	mitochondrion	74.22	74.76
TraesCS2A01G533200.1	Wheat	mitochondrion	74.22	74.76
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	60.14	74.56
TraesCS2D01G535100.1	Wheat	mitochondrion	73.75	74.28
GSMUA_Achr11P...	Banana	cytosol	60.86	73.07
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	65.39	72.11
HORVU2Hr1G001820.1	Barley	plastid	80.43	71.55
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	60.38	69.7
GSMUA_Achr1P03360_001	Banana	peroxisome	57.04	69.48
Os07t0437000-01	Rice	mitochondrion	64.44	67.84
GSMUA_Achr4P25050_001	Banana	cytosol	60.86	67.46
KRH67507	Soybean	cytosol, peroxisome, plastid	67.78	66.98
KRG95789	Soybean	cytosol, peroxisome, plastid	67.78	66.98
Solyc09g064160.2.1	Tomato	cytosol	65.39	66.02
CDY14900	Canola	cytosol	61.1	65.98
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	62.77	65.91
VIT_07s0005g04800.t01	Wine grape	cytosol	66.59	65.8
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	64.92	65.54
Bra032499.1-P	Field mustard	cytosol	65.87	65.4
GSMUA_Achr2P04250_001	Banana	cytosol	58.95	65.17
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	70.88	65.13
HORVU2Hr1G116980.1	Barley	plastid	73.99	64.85
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	65.39	64.78
Solyc06g083700.2.1	Tomato	cytosol	64.2	64.66
PGSC0003DMT400051713	Potato	cytosol	64.2	64.66
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	64.68	64.52
CDX89837	Canola	cytosol, peroxisome, plastid	64.68	64.52
CDY72645	Canola	cytosol	52.51	64.33
CDY14230	Canola	cytosol	60.86	64.23
CDY18209	Canola	cytosol, peroxisome, plastid	64.68	64.22
CDX97452	Canola	cytosol	65.16	64.08
KRH32274	Soybean	cytosol	64.68	64.07
CDY35214	Canola	cytosol	64.92	63.85
Bra011055.1-P	Field mustard	cytosol	64.92	63.85
CDY69333	Canola	cytosol	63.48	63.79
AT5G43890.1	Thale cress	cytosol	64.44	63.68
AT1G04180.1	Thale cress	cytosol	63.96	63.66
CDY10073	Canola	cytosol, peroxisome, plastid	63.96	63.66
CDX94734	Canola	cytosol, peroxisome, plastid	64.68	63.62
CDY06876	Canola	cytosol	64.68	63.62
Bra010354.1-P	Field mustard	cytosol	64.68	63.62
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	64.68	63.62
PGSC0003DMT400038139	Potato	peroxisome	61.81	63.48
CDY22326	Canola	cytosol	64.44	63.38
Bra015334.1-P	Field mustard	plastid	65.87	63.3
CDX89807	Canola	plastid	65.87	63.3
CDY32533	Canola	cytosol	63.72	63.27
CDY61147	Canola	plastid	65.63	63.07
GSMUA_Achr1P24210_001	Banana	cytosol	57.04	63.06
Bra032524.1-P	Field mustard	cytosol	63.48	63.03
Solyc06g008050.2.1	Tomato	peroxisome	61.81	63.02
CDY53200	Canola	golgi, peroxisome, plastid	64.44	62.79
AT1G04610.1	Thale cress	cytosol	65.16	62.47
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	32.46	62.39
KRH33524	Soybean	cytosol, peroxisome, plastid	65.63	62.36
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	55.85	62.07
AT4G28720.1	Thale cress	cytosol	63.01	61.97
KRG90286	Soybean	cytosol, peroxisome, plastid	64.92	61.96
AT2G33230.1	Thale cress	plastid	63.72	61.95
CDY17153	Canola	peroxisome	63.96	61.47
GSMUA_AchrUn_...	Banana	mitochondrion	57.52	61.17
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	63.48	61.01
CDY19472	Canola	cytosol, peroxisome, plastid	63.48	61.01
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	62.77	60.05
PGSC0003DMT400030255	Potato	cytosol	58.95	58.95
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	34.84	58.87
Solyc09g091090.1.1	Tomato	peroxisome	58.71	57.08
Zm00001d005602_P001	Maize	endoplasmic reticulum	27.45	56.1
Os05t0528600-01	Rice	extracellular	52.03	53.83
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	52.03	53.69
Os01t0732700-01	Rice	cytosol	56.09	53.17
Os03t0162000-01	Rice	peroxisome	51.55	51.31
Os01t0224700-01	Rice	peroxisome	49.88	47.61
Os12t0512000-01	Rice	peroxisome	48.93	45.76
Os01t0273800-01	Rice	cytosol	42.24	44.47
Os11t0207900-00	Rice	endoplasmic reticulum	41.05	44.44
Os11t0207700-00	Rice	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	40.57	43.93
Os01t0274100-00	Rice	cytosol, peroxisome, plastid	42.96	43.8
Os02t0272200-00	Rice	extracellular	39.62	43.23
Os12t0189500-00	Rice	peroxisome, plasma membrane, plastid	41.29	41.29
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	60.62	31.17
HORVU7Hr1G007860.1	Barley	cytosol	60.86	30.69

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EntrezGene:4334994	EMBL:AK068976	ProteinID:BAF14002.1	ProteinID:BAS87694.1
ProteinID:CAE03813.2	ProteinID:CAE76085.1	ProteinID:EAZ29550.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EnsemblPlantsGene:Os04g0128900	EnsemblPlants:Os04t0128900-01	PFAM:PF00743
PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	UniProt:Q7XP26
SUPFAM:SSF51905	TMHMM:TMhelix	UniParc:UPI00001B193E	RefSeq:XP_015634157.1	SEG:seg	:

Description

YUCCA-LIKE GENE 7Flavin monooxygenase-like enzyme, Auxin biosynthesis (Os04t0128900-01)

Coordinates

chr4:-:1813960..1816070

Molecular Weight (calculated)

45785.3 Da

IEP (calculated)

8.915

GRAVY (calculated)

0.004

Length

419 amino acids

Sequence
(BLAST)

001: MVLQHSDRMD SLFSPQTSWV SGPIIVGAGP SGLAVAASLR EQGVPFTMLE RADCIASLWQ KRTYDRLKLH LPKQFCELPR MAFPAHYPEY PTRRQFIDYL
101: EDYAAAFDIN PLFGHTVLSA RYDETSGLWR VRASSSAGAE MEYIGSWLVV ATGENAESVV PDIPGIDGFG GEVVHVADYK SGEAYRGKRV LVVGCGNSGM
201: EVSLDLCDHG ARPAMVVRDA VHVLPREVLG KSTFELAVLL MAWLPLWLVD KILVLLAWLV LGNLAKLGIR RPATGPLELK NTTGRTPVLD YGALARIRSG
301: EITVVPGVAR FGRGFAELAD GRVIALDAVV LATGYRSNVP QWLQGNDFFN KDGYPKTAFP NGWKGESGLY AVGFTRRGLS GASADAMRAA KDLARVWKEA
401: TKPTKKSTAC HRRCISVIF

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.