Factsheet for Os03t0162000-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93186	Sorghum	cytosol	80.05	77.47
TraesCS4D01G276600.1	Wheat	cytosol	76.96	77.33
TraesCS4A01G027500.1	Wheat	plastid	76.48	77.22
HORVU4Hr1G073700.1	Barley	cytosol	75.3	76.39
Zm00001d027759_P001	Maize	plastid	78.15	75.63
TraesCS4B01G278300.1	Wheat	cytosol	75.53	72.77
GSMUA_Achr4P03000_001	Banana	mitochondrion	51.54	57.71
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	54.39	57.11
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	52.02	53.94
Os04t0128900-01	Rice	peroxisome	51.31	51.55
Os05t0528600-01	Rice	extracellular	49.41	51.36
Os07t0437000-01	Rice	mitochondrion	47.98	50.75
Os01t0732700-01	Rice	cytosol	51.07	48.64
Os01t0224700-01	Rice	peroxisome	48.46	46.47
Os12t0512000-01	Rice	peroxisome	49.17	46.21
Os11t0207900-00	Rice	endoplasmic reticulum	40.14	43.67
Os01t0273800-01	Rice	cytosol	40.14	42.46
Os11t0207700-00	Rice	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	38.95	42.38
Os02t0272200-00	Rice	extracellular	38.0	41.67
Os01t0274100-00	Rice	cytosol, peroxisome, plastid	39.91	40.88
Os12t0189500-00	Rice	peroxisome, plasma membrane, plastid	40.14	40.33

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EntrezGene:4331709	ProteinID:ABF94120.1	EMBL:AK072466	ProteinID:BAF10962.1
ProteinID:BAG14341.1	ProteinID:BAS82425.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
EnsemblPlantsGene:Os03g0162000	EnsemblPlants:Os03t0162000-01	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR43539	PANTHER:PTHR43539:SF10	InterPro:Pyridine_nuc-diS_OxRdtase_2	UniProt:Q10RE2	SUPFAM:SSF51905	UniParc:UPI0000DB4C41
RefSeq:XP_015631027.1	RefSeq:XP_015631028.1	RefSeq:XP_015631029.1	SEG:seg	:	:

Description

CONSTITUTIVELY WILTED 1Flavin-containing monooxygenase (FMO), Auxin biosynthesis (Os03t0162000-01)

Coordinates

chr3:+:3355041..3360448

Molecular Weight (calculated)

45722.9 Da

IEP (calculated)

9.148

GRAVY (calculated)

-0.090

Length

421 amino acids

Sequence
(BLAST)

001: MQGQQKQNAG GGGGDNASPC IVLDGPIIVG AGPSGLAVAA TLRQHGAPFT VVERSGGVAD LWTNRTYDRL RLHLPKVFCE LPHVAFPPDF PTYPTKHDFL
101: RYLHSYAARF AIAPLLRRTV TRAWYDHPAS LWRVTTTTTS SSATSVITEY ASPWLVVASG ENAEVVVPKV KGRERFAGEA LHSSEYRSGE RFRGMRVLVV
201: GCGNSGMEMC LDLCEHGAMP FMSVRSGVHV LPREMFGAST FGIAMKLLRW LPIKMVDRFL LLVARMVLGD TEKYGLKRPK LGPLEIKNIT GKSPVLDVGA
301: WSLIKSGNIK IVPEVESFSG NGARFVDGNE MAFDAVIFAT GYRSNVPSWL QEDGELFTEE GKLRSSGSSS EWRWRGPNGL YCVGFSGRGL LGAGADALRA
401: AADIAGRWQE TQQAAANISS V

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.