Factsheet for TraesCS4B01G278300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G276600.1	Wheat	cytosol	92.22	96.18
TraesCS4A01G027500.1	Wheat	plastid	91.3	95.68
HORVU4Hr1G073700.1	Barley	cytosol	89.24	93.98
Os03t0162000-01	Rice	peroxisome	72.77	75.53
OQU93186	Sorghum	cytosol	73.46	73.79
Zm00001d027759_P001	Maize	plastid	72.54	72.87
GSMUA_Achr4P03000_001	Banana	mitochondrion	52.17	60.64
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	55.38	60.35
TraesCS3B01G261900.1	Wheat	cytosol	49.89	53.83
TraesCS5B01G107000.1	Wheat	peroxisome	24.94	51.9
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	49.2	51.07
TraesCS2B01G562800.1	Wheat	mitochondrion	47.83	50.24
TraesCS3B01G314700.1	Wheat	peroxisome	48.05	48.05
TraesCS3B01G176800.1	Wheat	cytosol	45.77	45.35
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	48.28	44.89
TraesCS2B01G595700.1	Wheat	endoplasmic reticulum, plastid	37.76	43.19
TraesCS2B01G595800.1	Wheat	endoplasmic reticulum, plastid	37.53	42.93
TraesCS2B01G596000.1	Wheat	endoplasmic reticulum, plastid	37.53	42.93
TraesCS2B01G601800.1	Wheat	extracellular	37.3	42.67
TraesCS2B01G596100.1	Wheat	extracellular	37.07	42.41
TraesCS7B01G004700.1	Wheat	extracellular	37.07	42.41
TraesCS2B01G600600.1	Wheat	extracellular	36.61	41.88
TraesCS5B01G538300.1	Wheat	extracellular	36.61	41.88
TraesCS5B01G216000.1	Wheat	cytosol, peroxisome, plasma membrane	37.76	41.67
TraesCS2B01G595900.1	Wheat	endoplasmic reticulum, extracellular, plastid	27.92	41.64
TraesCS2B01G596200.1	Wheat	plastid	35.47	40.58
TraesCS6B01G033700.1	Wheat	plasma membrane	29.98	40.43

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00368	PANTHER:PTHR43539	PANTHER:PTHR43539:SF10	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS4B01G278300	EnsemblPlants:TraesCS4B01G278300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:560662953..560665991

Molecular Weight (calculated)

47132.8 Da

IEP (calculated)

8.614

GRAVY (calculated)

-0.057

Length

437 amino acids

Sequence
(BLAST)

001: MDTMQAEQGN GGTSPRQSSC IVNGPIIVGA GPSGLAVAAT LRRHSVPFTI LERSDGIADL WTNRTYGQVV HGPPCPPPRY ATAYGRLRLH LPKVFCELPH
101: VRFPPELPTY PSKREFLSYL HSYTAHFSIS PLFGRTVTRA RFEEATSLWH VTAAADGGEV TEYVSKWLVV ASGENAEVVV PKVKGRERFA GEVLHSSEYK
201: SGERFKGKRV LVVGCGNSGM EMCLDLCEHG AIPFMSVRSG VHVLPREMLG SSTFGIAMKL LRWLPVKLVD RFLLLVAKMI LGDTEKYGLK RPKLGPLEIK
301: EVTGKSPVLD VGAWSFIKSG DIKVVAEVES LGCNGARFVD GNEMAFDAVI FATGYRSNVP SWLQNDGFFT EDGKPKARCP SNWRGPNGLY CVGFSGRGLL
401: GAGTDALRAA ADISGSWQEE MVAAGAGAGA AATISPV

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.