Factsheet for TraesCS5B01G216000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G217200.1	Wheat	cytosol, peroxisome, plasma membrane	97.22	96.73
TraesCS5D01G225200.1	Wheat	cytosol	95.2	94.72
Zm00001d008255_P001	Maize	plasma membrane	74.75	75.7
Os01t0273800-01	Rice	cytosol	75.0	74.62
KXG32253	Sorghum	cytosol, peroxisome, vacuole	74.75	72.91
Os01t0274100-00	Rice	cytosol, peroxisome, plastid	73.23	70.56
HORVU7Hr1G013170.3	Barley	cytosol	64.39	63.91
GSMUA_Achr8P00130_001	Banana	plasma membrane	56.06	62.54
Zm00001d047670_P001	Maize	cytosol, peroxisome, plastid	32.07	61.35
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	50.25	58.36
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	52.02	57.06
VIT_07s0104g01260.t01	Wine grape	plasma membrane	47.98	48.84
TraesCS2B01G601800.1	Wheat	extracellular	46.46	48.17
TraesCS6B01G033700.1	Wheat	plasma membrane	39.14	47.84
TraesCS5B01G538300.1	Wheat	extracellular	45.96	47.64
VIT_07s0104g01250.t01	Wine grape	extracellular	45.45	47.62
TraesCS2B01G595700.1	Wheat	endoplasmic reticulum, plastid	45.45	47.12
TraesCS7B01G004700.1	Wheat	extracellular	45.45	47.12
TraesCS2B01G595800.1	Wheat	endoplasmic reticulum, plastid	45.2	46.86
TraesCS2B01G596000.1	Wheat	endoplasmic reticulum, plastid	45.2	46.86
TraesCS2B01G600600.1	Wheat	extracellular	45.2	46.86
Solyc09g074430.2.1	Tomato	cytosol	45.71	46.65
TraesCS2B01G596100.1	Wheat	extracellular	44.95	46.6
KRH68103	Soybean	cytosol	44.95	46.35
KRG96368	Soybean	cytosol	44.7	45.38
TraesCS2B01G595900.1	Wheat	endoplasmic reticulum, extracellular, plastid	33.33	45.05
TraesCS2B01G596200.1	Wheat	plastid	43.43	45.03
TraesCS3B01G261900.1	Wheat	cytosol	44.19	43.21
TraesCS3B01G314700.1	Wheat	peroxisome	44.19	40.05
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	41.92	39.43
TraesCS5B01G107000.1	Wheat	peroxisome	20.45	38.57
TraesCS4B01G278300.1	Wheat	cytosol	41.67	37.76
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	44.7	37.66
TraesCS2B01G562800.1	Wheat	mitochondrion	39.14	37.26
TraesCS3B01G176800.1	Wheat	cytosol	41.41	37.19

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF13738	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF18	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
EnsemblPlantsGene:TraesCS5B01G216000	EnsemblPlants:TraesCS5B01G216000.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:388728723..388734352

Molecular Weight (calculated)

43671.3 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.243

Length

396 amino acids

Sequence
(BLAST)

001: MAQAAEGDKP QEEEEHEEEV IIVGAGPSGL AAAACLSLRG VRSLVLERDD CVGSLWRNRT YDRIRLHLAK QHSALPHAPH GPAAPTYLPR DDFVRYLDDY
101: AARFGVRVRL RREVREARFD EARGAWVVEA VDHATGLVER YAARYLVAAA GENDEKVLPE VPGLDGFPGN VMHACEYRTG KGMEGKAVLV VGSGNSGMEI
201: AYDLAEAGAA TSIIIRSELH LVTKEIWNVA MTLYRYLPLW LIDRIVLLMC SVVFGDTSRY GLRRPAIGPF SMKIHTPAYP VVDVGTYAKI KTGEIQVLPA
301: MKAVHGNVVE FADGKRHPFD AIVFATGYRS TTKKWLKSDD GLIGEDGMAR RSFPEHWKGE NGLYCAGMVR RGLYGSCEDA ESIAEDISKK KKPDQA

Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)

001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K

Arabidopsis Description

YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.