Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32253 | Sorghum | cytosol, peroxisome, vacuole | 88.75 | 85.47 |
| Zm00001d047670_P001 | Maize | cytosol, peroxisome, plastid | 43.99 | 83.09 |
| TraesCS5B01G216000.1 | Wheat | cytosol, peroxisome, plasma membrane | 75.7 | 74.75 |
| TraesCS5A01G217200.1 | Wheat | cytosol, peroxisome, plasma membrane | 75.7 | 74.37 |
| Os01t0273800-01 | Rice | cytosol | 75.45 | 74.12 |
| TraesCS5D01G225200.1 | Wheat | cytosol | 74.68 | 73.37 |
| Os01t0274100-00 | Rice | cytosol, peroxisome, plastid | 73.15 | 69.59 |
| HORVU7Hr1G013170.3 | Barley | cytosol | 66.24 | 64.91 |
| GSMUA_Achr8P00130_001 | Banana | plasma membrane | 53.45 | 58.87 |
| GSMUA_Achr3P08830_001 | Banana | cytosol, peroxisome, plastid | 48.34 | 55.43 |
| GSMUA_Achr9P17710_001 | Banana | endoplasmic reticulum | 51.15 | 55.4 |
| VIT_07s0104g01250.t01 | Wine grape | extracellular | 47.31 | 48.94 |
| VIT_07s0104g01260.t01 | Wine grape | plasma membrane | 48.08 | 48.33 |
| KRH68103 | Soybean | cytosol | 46.29 | 47.14 |
| Zm00001d023718_P002 | Maize | extracellular, vacuole | 47.31 | 46.37 |
| KRG96368 | Soybean | cytosol | 45.27 | 45.38 |
| Solyc09g074430.2.1 | Tomato | cytosol | 44.76 | 45.1 |
| Zm00001d005439_P001 | Maize | plastid | 43.73 | 42.96 |
| Zm00001d044069_P001 | Maize | cytosol, peroxisome, vacuole | 44.76 | 41.87 |
| Zm00001d004467_P001 | Maize | peroxisome, plasma membrane, plastid | 44.76 | 41.57 |
| Zm00001d005602_P001 | Maize | endoplasmic reticulum | 21.23 | 40.49 |
| Zm00001d027759_P001 | Maize | plastid | 44.76 | 40.23 |
| Zm00001d039323_P001 | Maize | cytosol, peroxisome, plastid | 43.99 | 39.81 |
| Zm00001d035294_P001 | Maize | cytosol | 43.99 | 38.74 |
| Zm00001d011764_P001 | Maize | cytosol | 43.99 | 37.89 |
| Zm00001d041402_P001 | Maize | cytosol, peroxisome, plasma membrane | 41.69 | 35.82 |
| Zm00001d025005_P002 | Maize | cytosol, peroxisome, plastid | 40.41 | 34.65 |
| Zm00001d030871_P001 | Maize | cytosol | 42.46 | 33.95 |
| Zm00001d030975_P001 | Maize | cytosol, peroxisome, plastid | 28.64 | 33.23 |
| Zm00001d019527_P005 | Maize | peroxisome | 31.2 | 28.37 |
| Zm00001d000445_P001 | Maize | plasma membrane | 44.76 | 27.39 |
| Zm00001d049077_P001 | Maize | endoplasmic reticulum, plasma membrane | 44.76 | 22.18 |
Protein Annotations
| EntrezGene:100282971 | MapMan:11.2.1.1.2 | Gene3D:3.50.50.60 | ProteinID:AQK89322.1 | UniProt:B6SKY5 | EMBL:BT087793 |
| EMBL:EU953400 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR036188 | PFAM:PF00743 |
| PIRSF:PIRSF000332 | PRINTS:PR00368 | PRINTS:PR00411 | PANTHER:PTHR43539 | PANTHER:PTHR43539:SF18 | SUPFAM:SSF51905 |
| UniParc:UPI000182BA3D | EnsemblPlantsGene:Zm00001d008255 | EnsemblPlants:Zm00001d008255_P001 | EnsemblPlants:Zm00001d008255_T001 | SEG:seg | : |
Description
Yucca6 Yucca6
Coordinates
chr8:-:3114456..3117313
Molecular Weight (calculated)
42690.4 Da
IEP (calculated)
8.345
GRAVY (calculated)
-0.045
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVAEEEVI VVGAGQSGLA VAACLSLRGV RALVLERDDC VGSLWRKRAY DRLHLHLTKK YCALPHAPHP AEAPAYLHRD DFARYLDGYA ARFAVRPRLR
101: REVRSARYDP ASARWEVEAV DLGTGQAERY AARFLVVASG ENAEKFLPEV PGLEAFPGQV MHAVEYRSAE GMRGKAVLVV GSGNSGMEIA YDLAAAGAVT
201: SIVVRGELHL VTKEIWNVAM TLYPYLPVWV IDKLVLLMCA VVFGDTSRHG LRRPAIGPFT MKLTTPGYPV VDVGTYAKIR SGEIRVLPAA VKSVRGNVVE
301: FGDGSRHPFD AIVFATGYRS TVRRWLKSED GLVGDDGMAA RSYPEHWKGD HGLYCAGMVR RGIYGSCEDA ELIAADISKL LHPKQEQGNG V
101: REVRSARYDP ASARWEVEAV DLGTGQAERY AARFLVVASG ENAEKFLPEV PGLEAFPGQV MHAVEYRSAE GMRGKAVLVV GSGNSGMEIA YDLAAAGAVT
201: SIVVRGELHL VTKEIWNVAM TLYPYLPVWV IDKLVLLMCA VVFGDTSRHG LRRPAIGPFT MKLTTPGYPV VDVGTYAKIR SGEIRVLPAA VKSVRGNVVE
301: FGDGSRHPFD AIVFATGYRS TVRRWLKSED GLVGDDGMAA RSYPEHWKGD HGLYCAGMVR RGIYGSCEDA ELIAADISKL LHPKQEQGNG V
001: METVVVIVGA GPAGLATSVC LNQHSIPNVI LEKEDIYASL WKKRAYDRLK LHLAKEFCQL PFMPHGREVP TFMSKELFVN YLDAYVARFD INPRYNRTVK
101: SSTFDESNNK WRVVAENTVT GETEVYWSEF LVVATGENGD GNIPMVEGID TFGGEIMHSS EYKSGRDFKD KNVLVVGGGN SGMEISFDLC NFGANTTILI
201: RTPRHVVTKE VIHLGMTLLK YAPVAMVDTL VTTMAKILYG DLSKYGLFRP KQGPFATKLF TGKAPVIDVG TVEKIRDGEI QVINGGIGSI NGKTLTFENG
301: HKQDFDAIVF ATGYKSSVCN WLEDYEYVMK KDGFPKAPMP KHWKGEKNLY CAGFSRKGIA GGAEDAMSVA DDIRSILATL KNN
101: SSTFDESNNK WRVVAENTVT GETEVYWSEF LVVATGENGD GNIPMVEGID TFGGEIMHSS EYKSGRDFKD KNVLVVGGGN SGMEISFDLC NFGANTTILI
201: RTPRHVVTKE VIHLGMTLLK YAPVAMVDTL VTTMAKILYG DLSKYGLFRP KQGPFATKLF TGKAPVIDVG TVEKIRDGEI QVINGGIGSI NGKTLTFENG
301: HKQDFDAIVF ATGYKSSVCN WLEDYEYVMK KDGFPKAPMP KHWKGEKNLY CAGFSRKGIA GGAEDAMSVA DDIRSILATL KNN
Arabidopsis Description
YUC10Probable indole-3-pyruvate monooxygenase YUCCA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.