Factsheet for Zm00001d030975_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79511	Sorghum	cytosol	74.48	55.65
Zm00001d030871_P001	Maize	cytosol	80.12	55.21
Zm00001d041402_P001	Maize	cytosol, peroxisome, plasma membrane	72.11	53.41
Zm00001d039323_P001	Maize	cytosol, peroxisome, plastid	64.39	50.23
Os01t0224700-01	Rice	peroxisome	56.68	43.51
TraesCS3D01G157600.1	Wheat	cytosol	54.6	41.72
HORVU3Hr1G030390.2	Barley	cytosol	54.6	41.53
TraesCS3A01G149500.1	Wheat	cytosol, peroxisome, plastid	53.71	41.04
TraesCS3B01G176800.1	Wheat	cytosol	53.71	41.04
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	46.88	37.8
Zm00001d005439_P001	Maize	plastid	43.32	36.68
Zm00001d011764_P001	Maize	cytosol	48.66	36.12
Zm00001d035294_P001	Maize	cytosol	46.29	35.14
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	43.32	34.68
Zm00001d005602_P001	Maize	endoplasmic reticulum	20.47	33.66
Zm00001d027759_P001	Maize	plastid	40.06	31.03
Zm00001d023718_P002	Maize	extracellular, vacuole	35.61	30.08
Zm00001d008255_P001	Maize	plasma membrane	33.23	28.64
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	38.28	28.29
Zm00001d047670_P001	Maize	cytosol, peroxisome, plastid	13.95	22.71
Zm00001d000445_P001	Maize	plasma membrane	37.09	19.56
Zm00001d019527_P005	Maize	peroxisome	24.63	19.3
Zm00001d049077_P001	Maize	endoplasmic reticulum, plasma membrane	37.09	15.84

Protein Annotations

EnsemblPlants:Zm00001d030975_P001	EnsemblPlants:Zm00001d030975_T001	EnsemblPlantsGene:Zm00001d030975	Gene3D:3.50.50.60	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
PANTHER:PTHR43539	PANTHER:PTHR43539:SF5	PFAM:PF13738	ProteinID:ONM01850.1	SEG:seg	SUPFAM:SSF51905
UniParc:UPI00084524BE	UniProt:A0A1D6KFF9	MapMan:11.2.1.1.2	:	:	:

Description

Indole-3-pyruvate monooxygenase YUCCA2

Coordinates

chr1:+:170334423..170337201

Molecular Weight (calculated)

37869.2 Da

IEP (calculated)

9.334

GRAVY (calculated)

-0.064

Length

337 amino acids

Sequence
(BLAST)

001: MDRFVAKTDG KRDSVLTYYS TFAESEGNIE HDQLMYSPRS VARAMVTGIP IGDQGVAMLQ GPLIVGAGPA GLVCAVELTM GSVPYVILER DMCIASMWHC
101: RTYRRLCLHL PKRYCQLPRM PFPHSYPTYP TKQQFLAYLD EYKRNHGIRP FFNMEVGHIL PREIMGLSTF TLSVWLLKFL NVKIVDQILL LLARLILGDT
201: KYIGISRPTL GPMELKSLSG KTPVLDVGTI SKIKSGDIKV FPAIESFQER GVQFIDGRIE SFDVAILATG YKSNVPYWLK ENDFFSQKNG FPRIPNEWKG
301: NNGLYAAGFS RRGLFGVSID ATKIANDIIQ SYNNTTS

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.