Factsheet for Zm00001d039323_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02224	Sorghum	peroxisome	89.58	90.85
Os01t0224700-01	Rice	peroxisome	68.98	67.88
Zm00001d041402_P001	Maize	cytosol, peroxisome, plasma membrane	69.91	66.37
Zm00001d030975_P001	Maize	cytosol, peroxisome, plastid	50.23	64.39
TraesCS3D01G157600.1	Wheat	cytosol	63.43	62.13
TraesCS3B01G176800.1	Wheat	cytosol	63.19	61.9
TraesCS3A01G149500.1	Wheat	cytosol, peroxisome, plastid	62.96	61.68
Zm00001d030871_P001	Maize	cytosol	69.44	61.35
HORVU3Hr1G030390.2	Barley	cytosol	62.73	61.17
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	51.85	53.59
Zm00001d005439_P001	Maize	plastid	48.61	52.76
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	50.93	52.26
Zm00001d035294_P001	Maize	cytosol	53.47	52.03
Zm00001d011764_P001	Maize	cytosol	54.17	51.54
Zm00001d027759_P001	Maize	plastid	46.76	46.44
Zm00001d023718_P002	Maize	extracellular, vacuole	42.82	46.37
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	47.45	44.96
Zm00001d008255_P001	Maize	plasma membrane	39.81	43.99
Zm00001d005602_P001	Maize	endoplasmic reticulum	20.83	43.9
Zm00001d047670_P001	Maize	cytosol, peroxisome, plastid	19.44	40.58
Zm00001d019527_P005	Maize	peroxisome	33.56	33.72
Zm00001d000445_P001	Maize	plasma membrane	40.28	27.23
Zm00001d049077_P001	Maize	endoplasmic reticulum, plasma membrane	40.51	22.18

Protein Annotations

EntrezGene:103649553	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	UniProt:A0A1D6MFB7	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM28322.1	PFAM:PF13738	PIRSF:PIRSF000332	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF5	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51735	SUPFAM:SSF51905
UniParc:UPI00022110FC	EnsemblPlantsGene:Zm00001d039323	EnsemblPlants:Zm00001d039323_P001	EnsemblPlants:Zm00001d039323_T001	SEG:seg	:

Description

Indole-3-pyruvate monooxygenase YUCCA2

Coordinates

chr3:-:1839047..1842858

Molecular Weight (calculated)

48032.9 Da

IEP (calculated)

9.342

GRAVY (calculated)

-0.191

Length

432 amino acids

Sequence
(BLAST)

001: MRPAEIMDRR RFAETEGKRA HDPLYSPRRA ARATATGFPV GEHGEVLAGP VIVGAGPAGL AVAACLTMRG VPYVLLERHG CVASLWRHRT YRRLRLHLPK
101: RFCELPLMPF PPSYPAYPTR EQFLAYLEDY IATFGIRPFF RQAVVSAEHD GDFWCVRTLD GGGTSREYRS KWLVVATGEN AEPVVPDIDG IHAFRGLVIH
201: SSDYRSGESY RGKKVLVIGC GNSGMEVSLD LSNHNVHTSM VVRDSVHVLP REIMGVSTFG LSLWLLTHLS IQKVDQILLV LTQLVLGDTA RLGIPRPNIG
301: PMELKRVSGK TPVLDVGTIA KIKSGDIKVY PAIQSFQEHG VQFIDGKSES FDVVILATGY KSNVPYWLKD KDLFSEKNGF PHNSNEWKGK NGLYAAGFSR
401: RGLLGVSMDA TNIADDILGC WNDFGYERHK RK

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.