Factsheet for Zm00001d044069_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87233	Sorghum	cytosol	89.0	88.15
TraesCS3D01G220500.1	Wheat	cytosol	77.27	78.97
HORVU3Hr1G057950.1	Barley	cytosol	76.56	78.82
TraesCS3B01G261900.1	Wheat	cytosol	76.08	78.52
TraesCS3A01G232600.1	Wheat	cytosol	76.79	78.48
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	74.88	77.09
GSMUA_AchrUn_...	Banana	peroxisome	54.07	65.89
GSMUA_Achr1P05290_001	Banana	peroxisome	55.26	64.89
PGSC0003DMT400067103	Potato	cytosol	48.09	60.18
Solyc06g065630.2.1	Tomato	cytosol	56.94	58.05
CDY71836	Canola	plastid	50.24	57.85
KRH61831	Soybean	cytosol	55.98	57.78
AT5G11320.1	Thale cress	cytosol	56.46	57.42
CDX97092	Canola	cytosol	56.46	57.42
Bra008971.1-P	Field mustard	cytosol	56.22	57.18
VIT_04s0008g04870.t01	Wine grape	cytosol	50.48	56.87
Bra023318.1-P	Field mustard	plastid	55.5	56.45
CDY50808	Canola	peroxisome	46.41	56.4
KRH16035	Soybean	cytosol	52.63	56.27
CDX85720	Canola	peroxisome	55.26	56.2
Bra040081.1-P	Field mustard	plastid	55.02	56.1
KRH52507	Soybean	cytosol	53.83	55.97
CDY39891	Canola	plastid	54.78	55.85
KRH05083	Soybean	cytosol	54.07	55.66
CDY23330	Canola	plastid	54.55	55.61
AT4G32540.2	Thale cress	cytosol	54.78	55.05
Zm00001d005439_P001	Maize	plastid	52.39	55.03
Bra011354.1-P	Field mustard	cytosol	55.02	55.02
CDX75253	Canola	cytosol	54.78	54.78
CDX68858	Canola	plastid	54.78	54.52
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	52.63	52.26
Zm00001d039323_P001	Maize	cytosol, peroxisome, plastid	53.59	51.85
Zm00001d035294_P001	Maize	cytosol	53.83	50.68
Zm00001d011764_P001	Maize	cytosol	54.31	50.0
Zm00001d027759_P001	Maize	plastid	51.67	49.66
CDY71529	Canola	cytosol, peroxisome	34.69	48.01
Zm00001d030975_P001	Maize	cytosol, peroxisome, plastid	37.8	46.88
Zm00001d041402_P001	Maize	cytosol, peroxisome, plasma membrane	49.28	45.27
Zm00001d008255_P001	Maize	plasma membrane	41.87	44.76
Zm00001d023718_P002	Maize	extracellular, vacuole	42.58	44.61
Zm00001d005602_P001	Maize	endoplasmic reticulum	21.29	43.41
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	47.13	43.2
Zm00001d030871_P001	Maize	cytosol	49.28	42.13
Zm00001d047670_P001	Maize	cytosol, peroxisome, plastid	19.62	39.61
Zm00001d019527_P005	Maize	peroxisome	34.45	33.49
Zm00001d000445_P001	Maize	plasma membrane	39.95	26.13
Zm00001d049077_P001	Maize	endoplasmic reticulum, plasma membrane	39.95	21.17

Protein Annotations

EntrezGene:100280444	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	ProteinID:ACI43575.1	UniProt:B6D9L5	EMBL:EU910941
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	ProteinID:ONM39864.1	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	SUPFAM:SSF51905
TMHMM:TMhelix	UniParc:UPI000181EC59	EnsemblPlantsGene:Zm00001d044069	EnsemblPlants:Zm00001d044069_P001	EnsemblPlants:Zm00001d044069_T001	SEG:seg

Description

sparse inflorescence1 sparse inflorescence1

Coordinates

chr3:-:218287295..218289461

Molecular Weight (calculated)

44358.8 Da

IEP (calculated)

10.136

GRAVY (calculated)

0.034

Length

418 amino acids

Sequence
(BLAST)

001: MDDDKQQLAR QEDQAGRASW VPGAVIVGAG PSGLAVAACL AARGVPATVL EMSDSLASTW RHRTYDRLTL HLPKRFCELP LLPFPRGYPA YPSKGQFVAY
101: LEAYAAAAGV APRFGARVEE AAFDAGAGAW ALRLAGAGGG GAGDLLLARW LVVATGENAV PRLPDLPGAA RFAGRVLHTC DYRSGEEFAG RKVLVVGCGN
201: SGMEVSLDLC RHGAAPSMVV RNTVHVLPRE MLGLSTFGIA MALLKLLPVR VVDRILLAAA RLALGDTGKL GLRRPKTGPI ELKNLTGRTP VLDVGTLAHI
301: KTGKIKVVGA VKEVTQRGVR FADGKEEQFD AIIQATGYRS NVPSWLKDGG DVFTSEGMPR IPFPNGWKGK NGLYAVGFSQ RGLLGASADA LNIARDIHRQ
401: WTDTATRPVV LRCNSAVV

Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.