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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:peroxisome
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008971.1-P Field mustard cytosol 87.09 63.99
CDX97092 Canola cytosol 85.1 62.53
CDX85720 Canola peroxisome 78.15 57.42
AT5G11320.1 Thale cress cytosol 76.82 56.45
CDY50808 Canola peroxisome 59.27 52.03
VIT_04s0008g04870.t01 Wine grape cytosol 60.93 49.6
GSMUA_Achr1P05290_001 Banana peroxisome 53.97 45.79
CDX87078 Canola extracellular 32.45 45.16
KRH61831 Soybean cytosol 58.94 43.95
CDY39891 Canola plastid 59.6 43.9
KRH05083 Soybean cytosol 58.94 43.84
KRH16035 Soybean cytosol 56.62 43.73
Solyc06g065630.2.1 Tomato cytosol 59.27 43.66
CDY23330 Canola plastid 58.94 43.41
KRH52507 Soybean cytosol 57.28 43.03
GSMUA_AchrUn_... Banana peroxisome 48.34 42.57
CDY71836 Canola plastid 50.99 42.42
CDX68858 Canola plastid 58.61 42.14
CDX75253 Canola cytosol 58.28 42.11
CDY72645 Canola cytosol 46.03 40.64
PGSC0003DMT400067103 Potato cytosol 44.37 40.12
Os01t0645400-02 Rice cytosol, peroxisome, plastid 50.66 37.68
TraesCS3B01G261900.1 Wheat cytosol 50.0 37.28
TraesCS3D01G220500.1 Wheat cytosol 49.67 36.67
HORVU3Hr1G057950.1 Barley cytosol 49.01 36.45
TraesCS3A01G232600.1 Wheat cytosol 49.34 36.43
OQU87233 Sorghum cytosol 48.68 34.83
Zm00001d044069_P001 Maize cytosol, peroxisome, vacuole 48.01 34.69
CDX94734 Canola cytosol, peroxisome, plastid 46.69 33.1
CDY06876 Canola cytosol 46.03 32.63
CDY35214 Canola cytosol 46.03 32.63
CDY22326 Canola cytosol 46.03 32.63
CDY14900 Canola cytosol 41.72 32.47
CDX89837 Canola cytosol, peroxisome, plastid 45.03 32.38
CDY10073 Canola cytosol, peroxisome, plastid 45.03 32.3
CDY18209 Canola cytosol, peroxisome, plastid 45.03 32.23
CDX97452 Canola cytosol 45.36 32.16
CDY14230 Canola cytosol 41.72 31.74
CDY32533 Canola cytosol 44.04 31.52
CDY17153 Canola peroxisome 45.36 31.42
CDY69333 Canola cytosol 43.05 31.18
CDY19472 Canola cytosol, peroxisome, plastid 44.7 30.96
CDY50238 Canola cytosol 34.11 30.93
CDY05502 Canola cytosol, nucleus, peroxisome 45.36 30.93
CDY54895 Canola cytosol, nucleus, peroxisome 45.36 30.93
CDX80530 Canola cytosol, nucleus, peroxisome 45.03 30.77
CDY53200 Canola golgi, peroxisome, plastid 43.71 30.7
CDY19798 Canola cytosol, nucleus, peroxisome 45.36 30.65
CDY62422 Canola cytosol, nucleus, peroxisome 44.7 30.54
CDX89807 Canola plastid 44.04 30.5
CDY61147 Canola plastid 44.04 30.5
CDY65511 Canola cytosol 33.77 30.36
CDY40617 Canola cytosol, extracellular, peroxisome 31.13 24.42
CDX93703 Canola cytosol, extracellular, peroxisome 31.13 24.42
CDX93705 Canola cytosol, extracellular, peroxisome 30.79 24.16
Protein Annotations
EnsemblPlants:CDY71529EnsemblPlantsGene:GSBRNA2T00016888001Gene3D:3.50.50.60GO:A0A078JXV6InterPro:FAD/NAD-bd_sfInterPro:IPR036188
PANTHER:PTHR43539PANTHER:PTHR43539:SF1ProteinID:CDY71529ProteinID:CDY71529.1SEG:segSUPFAM:SSF51905
UniParc:UPI0004EF3854UniProt:A0A078JXV6MapMan:11.2.1.1.2:::
Description
BnaAnng37780DBnaAnng37780D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXV6]
Coordinates
chrLK046235:+:3..1989
Molecular Weight (calculated)
34124.6 Da
IEP (calculated)
9.974
GRAVY (calculated)
0.082
Length
302 amino acids
Sequence
(BLAST)
001: PSKQQFISYV ESYAARFNIK PVFNQTVEKA EFDVASGLWT VKTQDAVYSS TWLVCLDLCR YNSLPHMVVR NSVHVLPRDF FGLSSFGIAM TLLKWFPLKL
101: VDNLLLLLAY LSLGNTDRLG LRRPKTGPIE LKNVTGKTPV LDVGAISLIQ SGQIRVMQAV KEITKKGAKF VNGQEMEFDS IILATGYKSN VPYWLKDNSF
201: FTKEGMPKTP FPNGWKGENG LYTVGFTRRG LLGTAFDAVK IAEDIRASLL RVPYYVLFFF FFFFCSLESK GQPLIKSFSL LFLPRSSNVC SSHIIHFDFN
301: KS
Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)
001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC
Arabidopsis Description
YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.