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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
  • peroxisome 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, peroxisome
Any Predictor:cytosol, extracellular, peroxisome
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93705 Canola cytosol, extracellular, peroxisome 99.74 99.74
CDX93703 Canola cytosol, extracellular, peroxisome 96.36 96.36
Bra018761.1-P Field mustard cytosol, extracellular, peroxisome 51.69 90.87
AT1G48910.1 Thale cress cytosol 78.18 78.59
KRH64052 Soybean vacuole 54.03 54.59
KRH53890 Soybean cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 53.77 54.33
TraesCS7A01G076100.1 Wheat endoplasmic reticulum, extracellular, plastid 28.57 52.63
CDY50238 Canola cytosol 45.19 52.25
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 27.27 52.24
CDY65511 Canola cytosol 45.45 52.08
HORVU0Hr1G001150.2 Barley plasma membrane 51.17 51.57
HORVU0Hr1G031640.2 Barley plasma membrane 51.17 51.57
TraesCS5B01G538300.1 Wheat extracellular 51.17 51.57
HORVU1Hr1G067720.2 Barley plasma membrane 50.91 51.31
TraesCS2D01G565800.1 Wheat endoplasmic reticulum 34.81 50.95
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 50.13 50.92
TraesCS7A01G076200.1 Wheat extracellular 50.39 50.79
TraesCS5D01G556600.1 Wheat plasma membrane 50.13 50.52
TraesCS4A01G325400.3 Wheat extracellular 50.39 50.52
TraesCSU01G186300.1 Wheat endoplasmic reticulum, plastid 42.6 50.46
HORVU1Hr1G022530.34 Barley extracellular 49.87 50.26
TraesCS2B01G601800.1 Wheat extracellular 49.87 50.26
TraesCS7A01G076300.1 Wheat endoplasmic reticulum, extracellular 49.87 50.26
TraesCSU01G038800.1 Wheat endoplasmic reticulum, extracellular, plastid 42.34 50.15
GSMUA_Achr3P10910_001 Banana endoplasmic reticulum, golgi, vacuole 43.64 50.0
TraesCS2D01G566100.1 Wheat plasma membrane 49.61 50.0
TraesCS2D01G566200.1 Wheat plasma membrane, plastid 37.4 50.0
TraesCS4A01G374200.1 Wheat extracellular, plastid 49.61 50.0
EES08388 Sorghum extracellular 46.75 49.86
TraesCS2A01G587400.1 Wheat extracellular 49.35 49.74
TraesCS2B01G595700.1 Wheat endoplasmic reticulum, plastid 49.35 49.74
TraesCS7D01G072000.1 Wheat endoplasmic reticulum, extracellular 49.35 49.74
TraesCS2A01G587600.1 Wheat extracellular 37.4 49.66
TraesCS2A01G587300.1 Wheat extracellular, plastid 37.14 49.65
TraesCS2B01G595800.1 Wheat endoplasmic reticulum, plastid 49.09 49.48
TraesCS2B01G596000.1 Wheat endoplasmic reticulum, plastid 49.09 49.48
TraesCS7D01G071500.1 Wheat extracellular, plastid 49.09 49.48
TraesCS4A01G374400.1 Wheat extracellular 33.25 49.42
TraesCS6B01G033700.1 Wheat plasma membrane 41.56 49.38
Os11t0207700-00 Rice endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 49.61 49.35
TraesCS7A01G076000.1 Wheat endoplasmic reticulum, extracellular 32.73 49.22
TraesCS2A01G587200.1 Wheat extracellular 48.83 49.21
TraesCS2A01G587500.1 Wheat extracellular, plastid 48.83 49.21
TraesCS2B01G596100.1 Wheat extracellular 48.83 49.21
TraesCS2B01G600600.1 Wheat extracellular 48.83 49.21
TraesCS4A01G374300.1 Wheat extracellular, plastid 48.83 49.21
TraesCS4A01G379900.1 Wheat extracellular 48.83 49.21
TraesCS7B01G004700.1 Wheat extracellular 48.83 49.21
TraesCS7D01G071400.1 Wheat extracellular 48.83 49.21
EES08387 Sorghum extracellular, plasma membrane 48.05 49.2
TraesCS2B01G595900.1 Wheat endoplasmic reticulum, extracellular, plastid 37.4 49.15
Os11t0207900-00 Rice endoplasmic reticulum 49.35 49.1
HORVU0Hr1G000290.1 Barley extracellular 42.6 48.96
HORVU7Hr1G017680.1 Barley extracellular 48.57 48.95
TraesCS4A01G380000.1 Wheat extracellular 42.34 48.95
TraesCS7A01G459600.1 Wheat extracellular 48.05 48.94
TraesCS7A01G075400.1 Wheat plasma membrane 48.57 48.83
PGSC0003DMT400094923 Potato extracellular 48.31 48.82
Solyc09g091870.1.1 Tomato golgi 48.31 48.82
TraesCS7D01G071900.1 Wheat cytosol 26.75 48.82
HORVU1Hr1G022670.1 Barley extracellular 48.31 48.69
TraesCS4A01G374500.1 Wheat extracellular, plastid 48.31 48.69
TraesCS7D01G071800.1 Wheat extracellular, plastid 48.31 48.69
HORVU7Hr1G017660.1 Barley extracellular 48.57 48.57
TraesCS4A01G373500.1 Wheat plasma membrane 48.31 48.56
TraesCS7D01G070900.1 Wheat extracellular, plasma membrane 48.31 48.56
OQU78863 Sorghum extracellular 48.31 48.44
HORVU7Hr1G023910.1 Barley endoplasmic reticulum, extracellular, plastid 48.05 48.43
PGSC0003DMT400092778 Potato extracellular, peroxisome, plasma membrane 41.82 48.35
HORVU7Hr1G017620.2 Barley plasma membrane 48.31 48.06
Solyc09g091720.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 47.53 48.03
HORVU7Hr1G017630.2 Barley extracellular 47.79 47.92
PGSC0003DMT400090184 Potato cytosol 28.57 47.83
Os02t0272200-00 Rice extracellular 47.27 47.4
PGSC0003DMT400088054 Potato cytosol 38.44 47.28
PGSC0003DMT400097007 Potato cytosol, peroxisome, plastid 47.27 47.15
TraesCS2B01G596200.1 Wheat plastid 46.75 47.12
Zm00001d023718_P002 Maize extracellular, vacuole 47.79 46.12
GSMUA_Achr3P10900_001 Banana cytosol, peroxisome, plasma membrane 38.44 46.11
TraesCS2D01G565900.1 Wheat cytosol, nucleus, peroxisome 37.92 45.77
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 44.94 45.29
Os12t0189500-00 Rice peroxisome, plasma membrane, plastid 47.53 43.68
PGSC0003DMT400085760 Potato cytosol, nucleus, peroxisome 27.27 43.57
GSMUA_Achr6P17640_001 Banana plastid 36.36 43.21
CDY14900 Canola cytosol 42.34 42.01
CDY71836 Canola plastid 39.48 41.87
CDY50808 Canola peroxisome 36.88 41.28
CDX89837 Canola cytosol, peroxisome, plastid 44.42 40.71
CDX97092 Canola cytosol 43.38 40.63
CDX94734 Canola cytosol, peroxisome, plastid 44.94 40.61
CDY32533 Canola cytosol 44.42 40.52
CDY10073 Canola cytosol, peroxisome, plastid 44.16 40.38
CDY06876 Canola cytosol 44.68 40.38
CDY22326 Canola cytosol 44.68 40.38
CDY35214 Canola cytosol 44.68 40.38
CDY18209 Canola cytosol, peroxisome, plastid 43.9 40.05
CDY53200 Canola golgi, peroxisome, plastid 44.42 39.77
CDY23330 Canola plastid 42.34 39.76
CDY39891 Canola plastid 42.34 39.76
CDY62422 Canola cytosol, nucleus, peroxisome 45.45 39.59
CDY14230 Canola cytosol 40.78 39.55
CDX85720 Canola peroxisome 42.08 39.42
CDY69333 Canola cytosol 42.6 39.33
CDY61147 Canola plastid 44.42 39.22
CDX97452 Canola cytosol 43.38 39.2
CDX80530 Canola cytosol, nucleus, peroxisome 44.94 39.14
CDX89807 Canola plastid 44.16 38.99
CDY17153 Canola peroxisome 44.16 38.99
CDY19798 Canola cytosol, nucleus, peroxisome 45.19 38.93
CDX75253 Canola cytosol 42.08 38.76
CDY05502 Canola cytosol, nucleus, peroxisome 44.42 38.6
CDY54895 Canola cytosol, nucleus, peroxisome 44.42 38.6
CDY19472 Canola cytosol, peroxisome, plastid 43.64 38.53
CDX68858 Canola plastid 41.82 38.33
CDX87078 Canola extracellular 21.3 37.79
CDY72645 Canola cytosol 33.51 37.72
CDY71529 Canola cytosol, peroxisome 24.42 31.13
Zm00001d000445_P001 Maize plasma membrane 49.35 29.73
TraesCS2D01G566000.1 Wheat plastid 46.75 24.62
Zm00001d049077_P001 Maize endoplasmic reticulum, plasma membrane 49.09 23.95
Protein Annotations
KEGG:00982+1.14.13.8MapMan:11.2.1.1.2Gene3D:3.50.50.60GO:A0A078HS23UniProt:A0A078HS23EnsemblPlants:CDY40617
ProteinID:CDY40617ProteinID:CDY40617.1InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0050660GO:GO:0050661GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00071462001InterPro:IPR036188PFAM:PF13738
PIRSF:PIRSF000332PRINTS:PR00368PRINTS:PR00469PANTHER:PTHR43539PANTHER:PTHR43539:SF9InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905UniParc:UPI0004EE4780::::
Description
BnaC06g02330DBnaC06g02330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS23]
Coordinates
chrLK032475:+:276859..281045
Molecular Weight (calculated)
43526.7 Da
IEP (calculated)
9.100
GRAVY (calculated)
-0.185
Length
385 amino acids
Sequence
(BLAST)
001: METVVVIVGA GPAGLATSVC LNQHSIPNLI LEKEDIYASL WKKRAYDRLK LHLAKNFCQL PFMPHGPDVP TFMPKEFFID YLDAYVTRFD INPRYNRTVK
101: FSMFDMSNNK WRVEAENTVT GAIEVYWSEF VVVATGENGE RYIPEVKGLN NFCGEVVHSS MYKSGRDYKN KNVLVVGGGN SGMEISFDLN NYDANTAVLI
201: RTPRHILTKV EVYVGMLLLK YFPVRMVDTL VMMMSKARLF IYGDPSKYGL IRPNQGPFAT KFLTGRTPVI DVGTVRKIHE GKIQVINGGI RSIEGKTLTF
301: ENGLRQDFDV IVFATGYKSS VCNWLKNYEY VMRDDGFPKN PMPDHWKGEK NIYCAGFSRK GIAGAAQDAM SVAQDIKSIL ETARY
Best Arabidopsis Sequence Match ( AT1G48910.1 )
(BLAST)
001: METVVVIVGA GPAGLATSVC LNQHSIPNVI LEKEDIYASL WKKRAYDRLK LHLAKEFCQL PFMPHGREVP TFMSKELFVN YLDAYVARFD INPRYNRTVK
101: SSTFDESNNK WRVVAENTVT GETEVYWSEF LVVATGENGD GNIPMVEGID TFGGEIMHSS EYKSGRDFKD KNVLVVGGGN SGMEISFDLC NFGANTTILI
201: RTPRHVVTKE VIHLGMTLLK YAPVAMVDTL VTTMAKILYG DLSKYGLFRP KQGPFATKLF TGKAPVIDVG TVEKIRDGEI QVINGGIGSI NGKTLTFENG
301: HKQDFDAIVF ATGYKSSVCN WLEDYEYVMK KDGFPKAPMP KHWKGEKNLY CAGFSRKGIA GGAEDAMSVA DDIRSILATL KNN
Arabidopsis Description
YUC10Probable indole-3-pyruvate monooxygenase YUCCA10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.