CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85720	Canola	peroxisome	93.6	78.35
CDX97092	Canola	cytosol	89.24	74.7
AT5G11320.1	Thale cress	cytosol	84.88	71.05
PGSC0003DMT400067103	Potato	cytosol	65.41	67.37
CDY71836	Canola	plastid	63.08	59.78
CDY71529	Canola	cytosol, peroxisome	52.03	59.27
KRH61831	Soybean	cytosol	67.15	57.04
KRH52507	Soybean	cytosol	65.7	56.22
KRH16035	Soybean	cytosol	63.08	55.5
KRH05083	Soybean	cytosol	65.41	55.42
Solyc06g065630.2.1	Tomato	cytosol	65.7	55.12
CDY39891	Canola	plastid	64.83	54.39
CDY23330	Canola	plastid	63.95	53.66
VIT_04s0008g04870.t01	Wine grape	cytosol	57.56	53.37
CDX75253	Canola	cytosol	63.37	52.15
GSMUA_Achr1P05290_001	Banana	peroxisome	53.78	51.97
CDX68858	Canola	plastid	63.37	51.9
GSMUA_AchrUn_...	Banana	peroxisome	51.74	51.9
Os01t0645400-02	Rice	cytosol, peroxisome, plastid	59.3	50.25
TraesCS3B01G261900.1	Wheat	cytosol	58.72	49.88
HORVU3Hr1G057950.1	Barley	cytosol	58.72	49.75
TraesCS3D01G220500.1	Wheat	cytosol	58.72	49.39
TraesCS3A01G232600.1	Wheat	cytosol	58.14	48.9
CDY14900	Canola	cytosol	53.78	47.68
Zm00001d044069_P001	Maize	cytosol, peroxisome, vacuole	56.4	46.41
OQU87233	Sorghum	cytosol	56.69	46.21
CDX94734	Canola	cytosol, peroxisome, plastid	56.98	46.01
CDY35214	Canola	cytosol	56.69	45.77
CDY06876	Canola	cytosol	56.69	45.77
CDY22326	Canola	cytosol	56.69	45.77
CDY14230	Canola	cytosol	52.62	45.59
CDY18209	Canola	cytosol, peroxisome, plastid	55.81	45.5
CDX89837	Canola	cytosol, peroxisome, plastid	55.52	45.48
CDX97452	Canola	cytosol	55.81	45.07
CDY10073	Canola	cytosol, peroxisome, plastid	54.94	44.89
CDY69333	Canola	cytosol	53.78	44.36
CDY32533	Canola	cytosol	54.36	44.31
CDY17153	Canola	peroxisome	56.1	44.27
CDY19472	Canola	cytosol, peroxisome, plastid	55.81	44.04
CDY54895	Canola	cytosol, nucleus, peroxisome	55.81	43.34
CDY05502	Canola	cytosol, nucleus, peroxisome	55.81	43.34
CDY19798	Canola	cytosol, nucleus, peroxisome	56.1	43.18
CDY53200	Canola	golgi, peroxisome, plastid	53.78	43.02
CDY62422	Canola	cytosol, nucleus, peroxisome	55.23	42.99
CDY61147	Canola	plastid	54.36	42.89
CDX89807	Canola	plastid	54.36	42.89
CDX80530	Canola	cytosol, nucleus, peroxisome	54.94	42.76
CDY72645	Canola	cytosol	42.15	42.4
CDY65511	Canola	cytosol	37.79	38.69
CDY50238	Canola	cytosol	37.21	38.44
CDY40617	Canola	cytosol, extracellular, peroxisome	41.28	36.88
CDX93705	Canola	cytosol, extracellular, peroxisome	40.99	36.62
CDX93703	Canola	cytosol, extracellular, peroxisome	40.7	36.36
CDX87078	Canola	extracellular	20.35	32.26

Protein Annotations

KEGG:00982+1.14.13.8	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	GO:A0A078INY9	UniProt:A0A078INY9	EnsemblPlants:CDY50808
ProteinID:CDY50808	ProteinID:CDY50808.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00097526001	InterPro:IPR036188	PFAM:PF13738
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF1	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	UniParc:UPI0004EDE3D0	:	:	:	:

Description

BnaCnng19720DBnaCnng19720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INY9]

Coordinates

chrLK032941:+:53269..54656

Molecular Weight (calculated)

38132.5 Da

IEP (calculated)

9.525

GRAVY (calculated)

-0.028

Length

344 amino acids

Sequence
(BLAST)

001: MNSCLEAEHS PIFVNGPIIV GAGPSGLSVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMKFPKN FPRYPSKQQF ISYIESYAAR
101: FNIEPVFNQT VEKAEFDVVS GLWKVKTQDG VYTSKWLVVA TGENAEPVVP DIPGLKNFTG PIVHTSAYKC GSEYANRKVL VVGCGNSGME VCLDLCRYNA
201: LPHMVVRNPV HVLPRDFFGL SSFGIAMTLL KWFPLKLVDN LLMLLANSYL GNTDRLGLRR PKTGPIELKN VTGKTPVLDV GAISLIQSGQ IRVTQAVKEL
301: TKKGAKFVDG QEMGFESIIL ATGYKSNVPD WLKVLKSYTN RYSS

Best Arabidopsis Sequence Match ( AT5G11320.2 )
(BLAST)

001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKVLLSIYY LSYSLSCYIY VNVYMYM

Arabidopsis Description

YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.