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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023318.1-P Field mustard plastid 99.03 99.03
CDY50808 Canola peroxisome 78.35 93.6
CDX97092 Canola cytosol 90.75 90.75
AT5G11320.1 Thale cress cytosol 86.86 86.86
CDY71529 Canola cytosol, peroxisome 57.42 78.15
PGSC0003DMT400067103 Potato cytosol 55.72 68.56
VIT_04s0008g04870.t01 Wine grape cytosol 60.58 67.12
KRH16035 Soybean cytosol 63.75 67.01
KRH61831 Soybean cytosol 65.94 66.91
KRH05083 Soybean cytosol 65.94 66.75
KRH52507 Soybean cytosol 65.21 66.67
Solyc06g065630.2.1 Tomato cytosol 66.18 66.34
CDY39891 Canola plastid 65.69 65.85
CDY71836 Canola plastid 58.15 65.84
CDY23330 Canola plastid 65.21 65.37
CDX75253 Canola cytosol 64.23 63.16
CDX68858 Canola plastid 64.23 62.86
GSMUA_AchrUn_... Banana peroxisome 51.58 61.81
GSMUA_Achr1P05290_001 Banana peroxisome 52.55 60.67
TraesCS3B01G261900.1 Wheat cytosol 58.15 59.01
Os01t0645400-02 Rice cytosol, peroxisome, plastid 57.91 58.62
HORVU3Hr1G057950.1 Barley cytosol 57.66 58.37
TraesCS3D01G220500.1 Wheat cytosol 57.91 58.19
TraesCS3A01G232600.1 Wheat cytosol 57.18 57.46
OQU87233 Sorghum cytosol 56.93 55.45
Zm00001d044069_P001 Maize cytosol, peroxisome, vacuole 56.2 55.26
CDY14900 Canola cytosol 51.34 54.38
CDY14230 Canola cytosol 51.82 53.65
CDY35214 Canola cytosol 55.47 53.52
CDY06876 Canola cytosol 55.47 53.52
CDX97452 Canola cytosol 54.5 52.58
CDX89837 Canola cytosol, peroxisome, plastid 53.28 52.14
CDY18209 Canola cytosol, peroxisome, plastid 53.53 52.13
CDY10073 Canola cytosol, peroxisome, plastid 53.28 52.02
CDX94734 Canola cytosol, peroxisome, plastid 53.53 51.64
CDY72645 Canola cytosol 42.82 51.46
CDY32533 Canola cytosol 52.55 51.18
CDY22326 Canola cytosol 52.8 50.94
CDY17153 Canola peroxisome 54.01 50.92
CDY69333 Canola cytosol 51.58 50.84
CDY53200 Canola golgi, peroxisome, plastid 52.8 50.47
CDY54895 Canola cytosol, nucleus, peroxisome 54.26 50.34
CDY05502 Canola cytosol, nucleus, peroxisome 54.26 50.34
CDY19798 Canola cytosol, nucleus, peroxisome 54.74 50.34
CDY61147 Canola plastid 53.04 50.0
CDX89807 Canola plastid 53.04 50.0
CDY19472 Canola cytosol, peroxisome, plastid 53.04 50.0
CDX80530 Canola cytosol, nucleus, peroxisome 53.53 49.77
CDY62422 Canola cytosol, nucleus, peroxisome 53.53 49.77
CDX87078 Canola extracellular 24.57 46.54
CDY50238 Canola cytosol 37.23 45.95
CDY65511 Canola cytosol 37.23 45.54
CDX93705 Canola cytosol, extracellular, peroxisome 39.42 42.08
CDY40617 Canola cytosol, extracellular, peroxisome 39.42 42.08
CDX93703 Canola cytosol, extracellular, peroxisome 39.17 41.82
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60GO:A0A078D926EnsemblPlants:CDX85720ProteinID:CDX85720ProteinID:CDX85720.1
InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004499
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0050660GO:GO:0050661
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00143467001InterPro:IPR036188PFAM:PF13738PIRSF:PIRSF000332PRINTS:PR00368
PRINTS:PR00469PANTHER:PTHR43539PANTHER:PTHR43539:SF1InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI0004EDF2CF
Description
BnaA02g00930D
Coordinates
chrLK031842:+:1416123..1418202
Molecular Weight (calculated)
45510.3 Da
IEP (calculated)
9.649
GRAVY (calculated)
-0.069
Length
411 amino acids
Sequence
(BLAST)
001: MNSCLEAEHS PIFVNGPIIV GAGPSGLSVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMKFPKN FPRYPSKQQF ISYIESYAAR
101: FNIKPVFNQT VEKAGFDVVS CLWKVKTQDA VYTSKWLVVA TGENAEPVVP DIPGLKNFTG PVVHTSAYKS GSEFANRKVL VVGCGNSGME VCLDLCRYNA
201: LPHMVVRNPL HVLPRDFFGL SSFGIAMTLL KWFPLKLVDN FLLLLANSYL GNTDRLGLRR PKTGPIELKN ATGKTPVLDV GAISLIQSGQ IRVRHAVKEL
301: TKKGAKFVDG QEMEFESIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGENGLYT VGFTKRGLLG TAFDAVKIAE NITDQWMKSN GPLSASNICS
401: SCIIHFHFNK S
Best Arabidopsis Sequence Match ( AT5G11320.1 )
(BLAST)
001: MGTCRESEPT QIFVPGPIIV GAGPSGLAVA ACLSNRGVPS VILERTDCLA SLWQKRTYDR LKLHLPKHFC ELPLMPFPKN FPKYPSKQLF ISYVESYAAR
101: FNIKPVFNQT VEKAEFDDAS GLWNVKTQDG VYTSTWLVVA TGENAEPVFP NIPGLKKFTG PVVHTSAYKS GSAFANRKVL VVGCGNSGME VSLDLCRYNA
201: LPHMVVRNSV HVLPRDFFGL STFGIAMTLL KWFPLKLVDK FLLLLANSTL GNTDLLGLRR PKTGPIELKN VTGKTPVLDV GAISLIRSGQ IKVTQAVKEI
301: TRNGAKFLNG KEIEFDSIIL ATGYKSNVPD WLKENSFFTK EGMPKTPFPN GWKGEKGLYT VGFTRRGLSG TAYDAVKIAE DITDQWMKFN GPLSCRNICS
401: SHIIHLHFNK S
Arabidopsis Description
YUC4YUC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ31]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.