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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • peroxisome 1
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19798 Canola cytosol, nucleus, peroxisome 94.47 45.86
CDX80530 Canola cytosol, nucleus, peroxisome 86.64 42.53
CDY62422 Canola cytosol, nucleus, peroxisome 86.18 42.31
AT5G25620.2 Thale cress cytosol 82.95 41.47
CDY05502 Canola cytosol, nucleus, peroxisome 83.87 41.08
CDY54895 Canola cytosol, nucleus, peroxisome 82.95 40.63
Solyc08g068160.1.1 Tomato cytosol 64.52 34.06
PGSC0003DMT400037628 Potato cytosol 64.98 33.81
VIT_04s0008g03920.t01 Wine grape cytosol 62.21 32.53
KRH62005 Soybean cytosol, nucleus, peroxisome, plastid 65.44 32.49
CDY71529 Canola cytosol, peroxisome 45.16 32.45
KRH52661 Soybean cytosol, nucleus, peroxisome, plastid 64.52 31.82
KRH16221 Soybean cytosol, nucleus, peroxisome 63.59 31.65
KRH04824 Soybean cytosol, nucleus, peroxisome 62.67 31.05
GSMUA_Achr10P... Banana cytosol, peroxisome, plastid 56.22 30.73
GSMUA_Achr9P05490_001 Banana cytosol 58.53 30.46
GSMUA_Achr2P19930_001 Banana cytosol 57.14 29.95
CDY72645 Canola cytosol 45.62 28.95
GSMUA_Achr5P06860_001 Banana peroxisome 57.14 28.77
Os05t0528600-01 Rice extracellular 53.46 28.64
GSMUA_Achr11P... Banana cytosol, golgi, peroxisome 56.22 27.54
KXG33311 Sorghum cytosol 53.92 26.83
Os01t0732700-01 Rice cytosol 54.38 26.7
TraesCS3A01G280900.1 Wheat peroxisome 53.0 26.32
TraesCS3D01G280900.1 Wheat peroxisome 53.0 26.32
HORVU3Hr1G069580.2 Barley cytosol 53.0 26.32
TraesCS3B01G314700.1 Wheat peroxisome 52.53 26.09
Zm00001d011764_P001 Maize cytosol 54.38 25.99
CDY14230 Canola cytosol 46.08 25.19
CDX97092 Canola cytosol 47.47 25.06
CDX85720 Canola peroxisome 46.54 24.57
CDY39891 Canola plastid 46.08 24.39
CDY23330 Canola plastid 46.08 24.39
CDX89837 Canola cytosol, peroxisome, plastid 47.0 24.29
CDY53200 Canola golgi, peroxisome, plastid 47.93 24.19
CDY18209 Canola cytosol, peroxisome, plastid 47.0 24.17
CDY10073 Canola cytosol, peroxisome, plastid 46.54 23.99
CDY14900 Canola cytosol 42.86 23.97
CDY32533 Canola cytosol 46.54 23.93
CDX75253 Canola cytosol 46.08 23.92
CDY19472 Canola cytosol, peroxisome, plastid 47.93 23.85
CDY06876 Canola cytosol 46.54 23.71
CDY35214 Canola cytosol 46.54 23.71
CDX89807 Canola plastid 47.47 23.62
CDY61147 Canola plastid 47.47 23.62
CDX68858 Canola plastid 45.62 23.57
CDY22326 Canola cytosol 46.08 23.47
CDX94734 Canola cytosol, peroxisome, plastid 46.08 23.47
CDY71836 Canola plastid 39.17 23.42
CDY17153 Canola peroxisome 47.0 23.39
CDX97452 Canola cytosol 45.16 23.0
CDY69333 Canola cytosol 43.78 22.78
CDY50238 Canola cytosol 34.1 22.22
CDY65511 Canola cytosol 34.1 22.02
CDY40617 Canola cytosol, extracellular, peroxisome 37.79 21.3
CDX93705 Canola cytosol, extracellular, peroxisome 37.79 21.3
CDX93703 Canola cytosol, extracellular, peroxisome 37.79 21.3
CDY50808 Canola peroxisome 32.26 20.35
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60GO:A0A078DIH5EnsemblPlants:CDX87078ProteinID:CDX87078ProteinID:CDX87078.1
InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004499
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0050660GO:GO:0050661GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00145972001InterPro:IPR036188PFAM:PF00743PANTHER:PTHR43539PANTHER:PTHR43539:SF13SUPFAM:SSF51905
UniParc:UPI0004EE4C02:::::
Description
BnaC09g03930D
Coordinates
chrLK031849:+:321836..323283
Molecular Weight (calculated)
24754.5 Da
IEP (calculated)
10.527
GRAVY (calculated)
-0.251
Length
217 amino acids
Sequence
(BLAST)
001: MAGIHPNLFY FVHVLPREML GTSTFGLSML LLKWLPIRLV DRFLLAVSRF ILGDTTMLGL NRPRLGPLEL KNRIGKTPVL DVGTLAKIKT GDIKVCSGIR
101: RLKQHEVEFD NGITERFDVI ILATGYKSNV PSWLKENKMF SKKDGFPIQE FPEGWRGESG LYAVGFTKRG IFGASMDAKK IAQDIFECSR KSYQAHRHIQ
201: LQCKLENRKK RKLSEND
Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)
001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC
Arabidopsis Description
YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.