Factsheet for VIT_04s0008g03920.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16221	Soybean	cytosol, nucleus, peroxisome	78.31	74.54
KRH04824	Soybean	cytosol, nucleus, peroxisome	77.59	73.52
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	77.35	73.46
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	76.14	71.82
Solyc08g068160.1.1	Tomato	cytosol	71.08	71.78
VIT_11s0016g03930.t01	Wine grape	cytosol, nucleus, peroxisome	72.05	70.85
PGSC0003DMT400037628	Potato	cytosol	70.6	70.26
GSMUA_Achr9P05490_001	Banana	cytosol	67.95	67.63
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	69.4	66.67
GSMUA_Achr2P19930_001	Banana	cytosol	66.51	66.67
AT5G25620.2	Thale cress	cytosol	69.64	66.59
CDX80530	Canola	cytosol, nucleus, peroxisome	69.4	65.16
CDY62422	Canola	cytosol, nucleus, peroxisome	69.4	65.16
CDY05502	Canola	cytosol, nucleus, peroxisome	69.16	64.79
Os01t0732700-01	Rice	cytosol	68.92	64.71
KXG33311	Sorghum	cytosol	67.95	64.68
Bra036547.1-P	Field mustard	cytosol	68.67	64.63
CDY54895	Canola	cytosol, nucleus, peroxisome	68.92	64.56
Bra020509.1-P	Field mustard	cytosol	67.71	64.3
HORVU3Hr1G069580.2	Barley	cytosol	67.47	64.07
CDY19798	Canola	cytosol, nucleus, peroxisome	68.92	63.98
TraesCS3A01G280900.1	Wheat	peroxisome	66.75	63.39
TraesCS3B01G314700.1	Wheat	peroxisome	66.51	63.16
TraesCS3D01G280900.1	Wheat	peroxisome	66.51	63.16
CDX87078	Canola	extracellular	32.53	62.21
Os05t0528600-01	Rice	extracellular	60.48	61.98
GSMUA_Achr5P06860_001	Banana	peroxisome	64.34	61.95
Zm00001d011764_P001	Maize	cytosol	67.47	61.67
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	63.86	59.82
VIT_04s0023g01480.t01	Wine grape	plasma membrane	56.63	59.49
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	56.63	59.19
VIT_07s0005g04800.t01	Wine grape	cytosol	59.52	58.25
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	58.8	55.71
VIT_04s0008g04870.t01	Wine grape	cytosol	49.64	55.53
VIT_18s0001g15100.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.86	48.02
VIT_18s0001g15190.t01	Wine grape	cytosol	41.93	45.91
VIT_07s0104g01250.t01	Wine grape	extracellular	40.96	44.97
VIT_07s0104g01260.t01	Wine grape	plasma membrane	41.69	44.47

Protein Annotations

EntrezGene:100252539	wikigene:100252539	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	ProteinID:CCB46725	ProteinID:CCB46725.1
UniProt:F6H2Z0	InterPro:FAD/NAD-bd_sf	EMBL:FN595231	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009819
GO:GO:0009851	GO:GO:0009987	GO:GO:0016491	GO:GO:0047134	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100252539	wikigene:LOC100252539	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905
UniParc:UPI00015C8A79	ArrayExpress:VIT_04s0008g03920	EnsemblPlantsGene:VIT_04s0008g03920	EnsemblPlants:VIT_04s0008g03920.t01	RefSeq:XP_002281597	RefSeq:XP_002281597.1
RefSeq:XP_010648530.1	:	:	:	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:F6H2Z0]

Coordinates

chr4:-:3247689..3250173

Molecular Weight (calculated)

46679.9 Da

IEP (calculated)

9.245

GRAVY (calculated)

-0.195

Length

415 amino acids

Sequence
(BLAST)

001: MDFLREIEGK RAHDPIFNDK AMSCGRSLIL GPVIVGAGPS GLATAACLKE KGVPSVILER SNRIASLWQL NTYDRLCLHL PKQFCELPLM PFPENFPTYP
101: TKQQFIEYLE AYAERFDIQP RFNESVARAE YDHTLGFWRV KTETTEYLCR WLIVATGENA EAVVPEIEGR RKFGGPIVHT SSYKSGDVYR GKRVLVVGCG
201: NSGMEVCLDL CNHNARPSLV VRDSVHILPR QMLGKSTFGL SMWLLKWLPM RLVDHLLLIV SRFMLGDTAK FGLDRPKLGP LELKNLSGKT PVLDVGTLAK
301: IKSGDIKICP GIRQLKCHAV EFVDGRTENF DAIIFATGYK SNVPFWLKER DLFSEKDGLP RRPFPNGWKG NCGLYAVGFT KRGLLGASMD AKRISEDIER
401: CWKADAKRLT VKSHT

Best Arabidopsis Sequence Match ( AT5G25620.1 )
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQVKKI

Arabidopsis Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.