Factsheet for VIT_04s0023g01480.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	55.7	61.8
TraesCS5B01G107000.1	Wheat	peroxisome	32.41	60.95
GSMUA_Achr4P03480_001	Banana	extracellular	56.46	60.76
VIT_11s0016g03930.t01	Wine grape	cytosol, nucleus, peroxisome	61.27	57.35
VIT_04s0008g03920.t01	Wine grape	cytosol	59.49	56.63
HORVU5Hr1G028100.1	Barley	golgi, mitochondrion, peroxisome	50.38	56.06
VIT_04s0008g04870.t01	Wine grape	cytosol	50.63	53.91
TraesCS5D01G114500.1	Wheat	cytosol	58.48	53.6
TraesCS5A01G102700.1	Wheat	cytosol	57.72	52.9
VIT_07s0005g04800.t01	Wine grape	cytosol	56.71	52.83
Zm00001d035294_P001	Maize	cytosol	58.23	51.8
EES16059	Sorghum	cytosol	57.97	51.12
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	55.95	50.46
Os12t0512000-01	Rice	peroxisome	56.96	50.22
VIT_18s0001g15100.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.54	45.38
VIT_07s0104g01260.t01	Wine grape	plasma membrane	43.04	43.7
VIT_18s0001g15190.t01	Wine grape	cytosol	41.52	43.27
VIT_07s0104g01250.t01	Wine grape	extracellular	38.48	40.21

Protein Annotations

EntrezGene:100252977	wikigene:100252977	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	ProteinID:CBI17544	ProteinID:CBI17544.3
UniProt:D7SPG5	InterPro:FAD/NAD-bd_sf	EMBL:FN594959	InterPro:Flavin_mOase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100252977	wikigene:LOC100252977
PFAM:PF13738	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PFscan:PS51257	PANTHER:PTHR43539
PANTHER:PTHR43539:SF16	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI00015CAFB7	ArrayExpress:VIT_04s0023g01480	EnsemblPlantsGene:VIT_04s0023g01480
EnsemblPlants:VIT_04s0023g01480.t01	RefSeq:XP_002268001	RefSeq:XP_002268001.1	:	:	:

Description

No Description!

Coordinates

chr4:+:18026699..18028862

Molecular Weight (calculated)

44066.8 Da

IEP (calculated)

9.617

GRAVY (calculated)

-0.077

Length

395 amino acids

Sequence
(BLAST)

001: MMSKELKQVL IPGPLIIGAG PSGLAVAACL KKRGVPSLIL EKENCMASLW NLKTYDRLRL HLPKKFCELP YMKFPSEFPA YPTKQQFISY LEDYAKSFSI
101: EPMFGQEVRW TKYDRSMRLW QVEAKESKFL CRWLIVATGE NAEPVVPEIA GISNFGGRLL HTSIYKNGAD FKGSKVLVVG CGNSGMEVSL DLCNSGAQVS
201: LVVRDKLHVL PREIFGISTF ALSMWLLKWF PVSLVDGLIL LCSRMILGDT GQIGIKRPEF GPLHLKNATG KTPVLDVGAV AKIRSSEVKV VCGIRRFTAK
301: GVEFVNGEVQ EFDSVILATG YRSNVASWLK EGNFFSQKDG YPKNPFPNNW KGEDGAYSVG FTRRGLYGAS IDAQRVAEDI ARQWKSQMKH LHLDL

Best Arabidopsis Sequence Match ( AT5G25620.1 )
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQVKKI

Arabidopsis Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.