Factsheet for TraesCS5D01G114500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G107000.1	Wheat	peroxisome	48.03	98.57
TraesCS5A01G102700.1	Wheat	cytosol	95.36	95.36
HORVU5Hr1G028100.1	Barley	golgi, mitochondrion, peroxisome	77.73	94.37
EES16059	Sorghum	cytosol	76.57	73.66
Zm00001d035294_P001	Maize	cytosol	74.71	72.52
Os12t0512000-01	Rice	peroxisome	75.17	72.32
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	53.83	65.17
GSMUA_Achr4P03480_001	Banana	extracellular	54.06	63.49
VIT_04s0023g01480.t01	Wine grape	plasma membrane	53.6	58.48
TraesCS3D01G220500.1	Wheat	cytosol	51.51	54.28
TraesCS3D01G280900.1	Wheat	peroxisome	52.44	51.72
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	49.88	51.07
TraesCS2D01G535100.1	Wheat	mitochondrion	46.87	48.56
TraesCS4D01G276600.1	Wheat	cytosol	46.87	48.21
TraesCS3D01G157600.1	Wheat	cytosol	48.72	47.62
TraesCS5D01G225200.1	Wheat	cytosol	41.3	44.72
TraesCS7D01G060000.1	Wheat	plastid	38.75	42.93
TraesCS7D01G070900.1	Wheat	extracellular, plasma membrane	36.89	41.51
TraesCS2D01G565800.1	Wheat	endoplasmic reticulum	25.29	41.44
TraesCS7D01G071900.1	Wheat	cytosol	19.95	40.76
TraesCS2D01G566200.1	Wheat	plasma membrane, plastid	26.91	40.28
TraesCS7D01G071500.1	Wheat	extracellular, plastid	35.5	40.05
TraesCS5D01G556600.1	Wheat	plasma membrane	35.27	39.79
TraesCS7D01G071800.1	Wheat	extracellular, plastid	35.27	39.79
TraesCS2D01G566100.1	Wheat	plasma membrane	35.27	39.79
TraesCS7D01G072000.1	Wheat	endoplasmic reticulum, extracellular	34.8	39.27
TraesCS7D01G071400.1	Wheat	extracellular	34.34	38.74
TraesCS2D01G565900.1	Wheat	cytosol, nucleus, peroxisome	27.38	36.99
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	39.91	21.1
TraesCS2D01G566000.1	Wheat	plastid	34.11	20.11

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS5D01G114500
EnsemblPlants:TraesCS5D01G114500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:133859501..133867374

Molecular Weight (calculated)

47558.3 Da

IEP (calculated)

8.267

GRAVY (calculated)

-0.119

Length

431 amino acids

Sequence
(BLAST)

001: MPVSHRDLQL DAQPSAALLD CGQDGDVPRR VWVPGPVIVG AGPSGLATAA CLKARGVPSL VLERDACVAA SWRHRTYERM RLHLPRCFCE LPLAPFPPGT
101: PPYPTRDQFV AYLDDYARAF AVEPLLGARV RVAAYDAAIG FWRVTVEVVG KDAMTTMTTE FMSRWLVVAT GENAEPVWPD GVEGMDVYRG TMMHTSTYKR
201: GDEFAGKKVL VVGCGNSGME VSLDLCDNGA KASMVVRDKL HVLPRDILGI STFGLSVFLL KWFPMKWVDA LFLFFSRLIL GDTEKYGLQR PKIGPLQIKK
301: STGKTPVLDI GALRKIRDGE IKVVPAINRF TESGVEFADG RKEDFDDVIL ATGYKSNVPS WLKEDEFFSQ SDGFPRMAFP HSWRGKNGLY ATGFTRRGLM
401: GSSYDASRIA ADIANQWTEA LARNITAHNN A

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.