Factsheet for TraesCS4D01G276600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G027500.1	Wheat	plastid	95.23	95.68
HORVU4Hr1G073700.1	Barley	cytosol	93.08	93.98
TraesCS4B01G278300.1	Wheat	cytosol	96.18	92.22
Os03t0162000-01	Rice	peroxisome	77.33	76.96
OQU93186	Sorghum	cytosol	77.8	74.94
Zm00001d027759_P001	Maize	plastid	76.85	74.02
GSMUA_Achr4P03000_001	Banana	mitochondrion	54.42	60.64
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	57.52	60.1
TraesCS3D01G220500.1	Wheat	cytosol	52.03	53.3
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	51.55	51.31
TraesCS2D01G535100.1	Wheat	mitochondrion	49.88	50.24
TraesCS3D01G280900.1	Wheat	peroxisome	50.36	48.28
TraesCS5D01G114500.1	Wheat	cytosol	48.21	46.87
TraesCS7D01G070900.1	Wheat	extracellular, plasma membrane	42.24	46.21
TraesCS3D01G157600.1	Wheat	cytosol	47.97	45.58
TraesCS2D01G566200.1	Wheat	plasma membrane, plastid	30.55	44.44
TraesCS2D01G565800.1	Wheat	endoplasmic reticulum	27.45	43.73
TraesCS7D01G071500.1	Wheat	extracellular, plastid	39.62	43.46
TraesCS2D01G566100.1	Wheat	plasma membrane	39.38	43.19
TraesCS7D01G071800.1	Wheat	extracellular, plastid	39.14	42.93
TraesCS7D01G072000.1	Wheat	endoplasmic reticulum, extracellular	38.9	42.67
TraesCS7D01G071900.1	Wheat	cytosol	21.48	42.65
TraesCS7D01G071400.1	Wheat	extracellular	38.66	42.41
TraesCS5D01G556600.1	Wheat	plasma membrane	38.19	41.88
TraesCS5D01G225200.1	Wheat	cytosol	39.14	41.21
TraesCS2D01G565900.1	Wheat	cytosol, nucleus, peroxisome	30.79	40.44
TraesCS7D01G060000.1	Wheat	plastid	37.23	40.1
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	45.35	23.31
TraesCS2D01G566000.1	Wheat	plastid	38.66	22.16

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF10	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS4D01G276600	EnsemblPlants:TraesCS4D01G276600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:+:447910336..447912794

Molecular Weight (calculated)

45237.6 Da

IEP (calculated)

8.713

GRAVY (calculated)

-0.033

Length

419 amino acids

Sequence
(BLAST)

001: MDAMQGEQGN GGTSPRQSSC IVKGPIIVGA GPSGLAVAAT LRRHAVPFTI LERSDGIADL WTNRTYGRLR LHLPKVFCEL PHVRFPPEFP TYPSKREFLR
101: YLHSYTAHFS ISPLFGRTVT RARFDEATSL WHVTAAADGG EVTEYVSKWL VVASGENAEV VVPKVKGRER FAGEVLHSSE YKSGERFKGK RVLVVGCGNS
201: GMEMCLDLCE HGAIPFMSVR SGVHVLPREM LGSSTFGIAM KLLRWLPVKL VDMFLLLVAK MILGDTEKYG LKRPKLGPLE SKEVTGKSPV LDVGAWSLIK
301: SGNIKVVAEV ESLGCNGARF VDGNEMAFDA VIFATGYRSN VPSWLQNDGF FTEDGKPKAR CPSNWRGPNG LYCVGFSGRG LLGAGADALR AAADIAGSWQ
401: EEEMVAAGAG VGAATISPV

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.