Factsheet for TraesCS3D01G280900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G314700.1	Wheat	peroxisome	97.71	97.71
HORVU3Hr1G069580.2	Barley	cytosol	97.25	97.25
TraesCS3A01G280900.1	Wheat	peroxisome	96.34	96.34
Os01t0732700-01	Rice	cytosol	83.98	83.03
KXG33311	Sorghum	cytosol	78.49	78.67
Zm00001d011764_P001	Maize	cytosol	78.95	75.99
GSMUA_Achr9P05490_001	Banana	cytosol	65.45	68.59
VIT_04s0008g03920.t01	Wine grape	cytosol	63.16	66.51
Solyc08g068160.1.1	Tomato	cytosol	61.1	64.96
PGSC0003DMT400037628	Potato	cytosol	61.1	64.03
KRH16221	Soybean	cytosol, nucleus, peroxisome	63.84	63.99
KRH04824	Soybean	cytosol, nucleus, peroxisome	62.93	62.79
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	62.7	62.7
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	61.33	60.91
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	59.27	59.95
AT5G25620.2	Thale cress	cytosol	58.81	59.22
CDX80530	Canola	cytosol, nucleus, peroxisome	59.5	58.82
CDY62422	Canola	cytosol, nucleus, peroxisome	59.27	58.6
CDY54895	Canola	cytosol, nucleus, peroxisome	59.04	58.24
Bra036547.1-P	Field mustard	cytosol	58.12	57.6
CDY05502	Canola	cytosol, nucleus, peroxisome	58.35	57.56
Bra020509.1-P	Field mustard	cytosol	57.44	57.44
CDY19798	Canola	cytosol, nucleus, peroxisome	58.12	56.82
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	52.86	54.87
TraesCS3D01G220500.1	Wheat	cytosol	50.11	53.55
CDX87078	Canola	extracellular	26.32	53.0
TraesCS5D01G114500.1	Wheat	cytosol	51.72	52.44
TraesCS3D01G157600.1	Wheat	cytosol	52.17	51.7
TraesCS2D01G535100.1	Wheat	mitochondrion	48.97	51.44
TraesCS4D01G276600.1	Wheat	cytosol	48.28	50.36
TraesCS7D01G070900.1	Wheat	extracellular, plasma membrane	40.5	46.21
TraesCS5D01G556600.1	Wheat	plasma membrane	39.59	45.29
TraesCS2D01G566100.1	Wheat	plasma membrane	39.36	45.03
TraesCS7D01G071900.1	Wheat	cytosol	21.74	45.02
TraesCS7D01G060000.1	Wheat	plastid	40.05	44.99
TraesCS2D01G565800.1	Wheat	endoplasmic reticulum	27.0	44.87
TraesCS7D01G071400.1	Wheat	extracellular	39.13	44.76
TraesCS7D01G071500.1	Wheat	extracellular, plastid	38.9	44.5
TraesCS7D01G071800.1	Wheat	extracellular, plastid	38.9	44.5
TraesCS7D01G072000.1	Wheat	endoplasmic reticulum, extracellular	38.44	43.98
TraesCS5D01G225200.1	Wheat	cytosol	40.05	43.97
TraesCS2D01G566200.1	Wheat	plasma membrane, plastid	28.6	43.4
TraesCS2D01G565900.1	Wheat	cytosol, nucleus, peroxisome	30.89	42.32
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	44.16	23.68
TraesCS2D01G566000.1	Wheat	plastid	38.67	23.12

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009819	GO:GO:0009851
GO:GO:0009987	GO:GO:0016491	GO:GO:0047134	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS3D01G280900	EnsemblPlants:TraesCS3D01G280900.1	:

Description

No Description!

Coordinates

chr3D:-:388791980..388794723

Molecular Weight (calculated)

49067.5 Da

IEP (calculated)

8.589

GRAVY (calculated)

-0.193

Length

437 amino acids

Sequence
(BLAST)

001: MDHWSESEGK RVHDPIFQPR ISQNCRRPVE EFCRERSTDA AVTRSERCTW VPGPIIVGAG PSGLAVAACL KEKGVDSLIL ERSNCIASLW QLKTYDRLSL
101: HLPRQFCELP LMPFPADYPI YPSKEKFVAY LEKYAAQFGI CPKYNHVVVR AEYDEKLLLW RVRSQLTGRI EEEVEYISRW LVVATGENAE VVQPEIDGLK
201: EFKGTVVHTS AYKTGCAFAG KRVLVVGCGN SGMEVCLDLC DHNAQPHIVV RDTVHILPRE MLGQSTFGLS MWLLKWFPVH VVDRILLLVA RTMLGDTARL
301: GLKRPTVGPL ELKSLSGKTP VLDVGTFAKI RSGDIKVYPG IKKISGRQVE FLDTRSEDFD AIVLATGYKS NVPLWLKDRE LFSDKDGLPR KAFPNGWKGE
401: RGLYSVGLTR RGLMGTSIDA RRIAHDIEQQ LSAEGKL

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.