Factsheet for Bra020509.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05502	Canola	cytosol, nucleus, peroxisome	96.8	95.49
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	87.19	88.19
Bra036547.1-P	Field mustard	cytosol	86.5	85.71
AT5G25620.2	Thale cress	cytosol	83.75	84.33
Solyc08g068160.1.1	Tomato	cytosol	64.99	69.1
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	67.96	67.96
VIT_04s0008g03920.t01	Wine grape	cytosol	64.3	67.71
PGSC0003DMT400037628	Potato	cytosol	64.53	67.63
KRH16221	Soybean	cytosol, nucleus, peroxisome	67.28	67.43
KRH04824	Soybean	cytosol, nucleus, peroxisome	66.82	66.67
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	65.45	65.0
GSMUA_Achr9P05490_001	Banana	cytosol	59.73	62.59
Os05t0528600-01	Rice	extracellular	55.61	60.0
Os01t0732700-01	Rice	cytosol	59.04	58.37
GSMUA_Achr2P19930_001	Banana	cytosol	54.69	57.73
TraesCS3B01G314700.1	Wheat	peroxisome	57.67	57.67
KXG33311	Sorghum	cytosol	57.44	57.57
TraesCS3D01G280900.1	Wheat	peroxisome	57.44	57.44
HORVU3Hr1G069580.2	Barley	cytosol	57.44	57.44
TraesCS3A01G280900.1	Wheat	peroxisome	57.44	57.44
Zm00001d011764_P001	Maize	cytosol	57.89	55.73
Bra032499.1-P	Field mustard	cytosol	53.78	55.69
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	50.8	55.64
Bra008971.1-P	Field mustard	cytosol	51.26	54.5
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	51.95	54.05
Bra032524.1-P	Field mustard	cytosol	52.17	54.03
Bra023318.1-P	Field mustard	plastid	50.8	54.01
Bra011055.1-P	Field mustard	cytosol	52.4	53.76
Bra015334.1-P	Field mustard	plastid	53.32	53.44
GSMUA_Achr5P06860_001	Banana	peroxisome	52.63	53.36
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	52.86	52.98
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	53.55	52.82
Bra010354.1-P	Field mustard	cytosol	51.26	52.58
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	47.37	52.14
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	50.57	51.88
Bra040081.1-P	Field mustard	plastid	47.37	50.49
Bra011354.1-P	Field mustard	cytosol	47.14	49.28
Bra017913.1-P	Field mustard	cytosol	38.44	44.44
Bra018763.1-P	Field mustard	cytosol, extracellular, peroxisome	25.4	43.53
Bra018761.1-P	Field mustard	cytosol, extracellular, peroxisome	21.51	42.92

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra020509	EnsemblPlants:Bra020509.1	EnsemblPlants:Bra020509.1-P	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR036188	UniProt:M4DVG5	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00743	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51735	SUPFAM:SSF51905
UniParc:UPI0002546E79	:	:	:	:	:

Description

AT5G25620 (E=3e-213) YUC6 | YUC6 (YUCCA6); FAD binding / NADP or NADPH binding / flavin-containing monooxygenase/ monooxygenase/ oxidoreductase

Coordinates

chrA02:+:24896147..24898503

Molecular Weight (calculated)

48686.2 Da

IEP (calculated)

8.844

GRAVY (calculated)

-0.160

Length

437 amino acids

Sequence
(BLAST)

001: MEGKLAHDYL SSTKRHQHGM MTSPHRVCVV TGPVIVGAGP SGLATAACLK ERNITSVILE RSNCIASLWQ LKTYDRLHLH LPKQFCELPL VPFPDHFPTY
101: PTKQQFIEYL EDYARRFDIR PEFGQTVESA EFDANLGMWR VVSVGEEGTT EYVCRWLVAA TGENAEPVVP RFEGMEKFKA TGVVKHTSQY KTGGDFVGKK
201: VLVVGCGNSG MEVCLDLCNF GAQPSLVVRD AVHVLPREML GTSTFGLSML LLKWLPIQLV DSFLLVVSRF ILGDTTLLGL NRPLIGPLKL KNLTGKTPVL
301: DVGTLAKIKT GDIKVCSGIR RLKHHEVEFD NGRTERFDAI ILATGYKSNV PSWLKENKMF SKKDGFPMQE FPEGWRGECG LYAVGFTKRG IFGASMDAKR
401: IAQDIYESSR KSGQPHRHIQ VFMARKSDQA CSRVLDG

Best Arabidopsis Sequence Match ( AT5G25620.2 )
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQLQCKLGK RMKRKFSESD CGGN

Arabidopsis Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.